Job Description P14377 Confidence 98.25% Date Thu Jan 5 11:34:02 GMT 2012 Rank 40 Aligned Residues 101 % Identity 21% Template c1kijB_ PDB info PDB header:isomerase Chain: B: PDB Molecule:dna gyrase subunit b; PDBTitle: crystal structure of the 43k atpase domain of thermus thermophilus2 gyrase b in complex with novobiocin Resolution 2.30 Å

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		353	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.																			.	.	.	410	.	.	.	.
Predicted Secondary structure																																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	P	D	R	L	T	Q	V	L	L	N	L	Y	L	N	A	I	Q	A	I	G	Q	H	G	V	I	S	V	T	A	S	E	S	G	A	G	V	K	I	S	V	T	D	S	G	K	G	I	A	A	D	Q	L	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	I	F	T	P	Y	F	T
Query Conservation																																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																							.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																							.
Template Sequence		G	V	E	G	Y	H	H	L	F	K	E	I	L	D	N	A	V	D	E	A	L	A	G	Y	A	T	E	I	L	V	R	L	N	E	D	G	S	.	L	T	V	E	D	N	G	R	G	I	P	V	D	L	M	P	E	E	G	K	P	A	V	E	V	I	Y	N	T	L	H	S	G	G	K	F	E	Q	G	A	Y	K
Template Known Secondary structure		S																					T	T	S										T	T	S		.						S	S						S			T	T	T	T										S	S				S	G	G	G	S	S	S
Template Predicted Secondary structure																																							.
Template SS confidence
		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.		.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.
		415	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.																	.	.	.	.	.	440	.								.	.	.	.	.	.	.	.	450	.	.	.	.	.
Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.	.	.	.	.	.
Query SS confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.	.	.	.	.	.
Query Sequence		T	K	A	E	G	T	G	L	G	L	A	V	V	H	N	I	V	E	Q	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	T	I	Q	V	A	.	.	.	.	.	.	.	S	Q	E	G	K	G	S	T	F	T	L	W	L	P
Query Conservation																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.	.	.	.	.	.
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.	.	.	.	.	.													.
Template Conservation																																																																.
Template Sequence		V	S	G	G	L	H	G	V	G	A	S	V	V	N	A	L	S	E	W	T	V	V	E	V	F	R	E	G	K	H	H	R	I	A	F	S	R	G	E	V	T	E	P	L	R	V	V	G	E	A	P	R	G	K	T	G	T	R	V	T	F	K	.	P
Template Known Secondary structure				S		S	S	T	T	S							T											T	T									T	T														S	S										.
Template Predicted Secondary structure																																																																.
Template SS confidence
		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.		.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions