Job Description P0A6E9 Confidence 96.13% Date Thu Jan 5 11:02:58 GMT 2012 Rank 162 Aligned Residues 102 % Identity 19% Template c3crqA_ PDB info PDB header:transferase Chain: A: PDB Molecule:trna delta(2)-isopentenylpyrophosphate PDBTitle: structure of trna dimethylallyltransferase: rna2 modification through a channel Resolution 2.20 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40		.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																										.
Query SS confidence																																										.
Query Sequence		M	L	K	R	F	F	I	T	G	T	D	T	S	V	G	K	T	V	V	S	R	A	L	L	Q	A	L	A	S	Q	G	K	T	V	A	G	Y	K	P	V	.	A	K	G	S	K	E	T	P	E	G	L	R	N	K	D	A	L	V	L	Q	S	V	S	T	I	E	L	P	Y	E	A	V	N	P	I	A	L	S	E
Query Conservation																																										.
Alig confidence											.																		.	.	.	.	.									.																							.	.	.	.	.
Template Conservation											.																		.	.	.	.	.																																.	.	.	.	.
Template Sequence		L	P	P	A	I	F	L	M	G	.	P	T	A	A	G	K	T	D	L	A	M	A	L	A	D	A	L	.	.	.	.	.	P	C	E	L	I	S	V	D	S	A	L	I	Y	R	G	M	D	I	G	T	A	K	P	S	R	E	L	L	A	R	Y	.	.	.	.	.	P	H	R	L	I	D	I	R	D	P	A	E
Template Known Secondary structure											.	S	T	T	S	S										T	T	S	.	.	.	.	.									T	T	T	T	B	T	T			T	T	T	T										S	.	.	.	.	.				S	S	S		B		T	T	S
Template Predicted Secondary structure											.																		.	.	.	.	.																																.	.	.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.		.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.						30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60						.	.	.	.	.	.	.	.	.	70	.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	E	S	S	V	A	H	S	C	P	I	N	Y	T	L	I	S	N	G	L	A	N	L	T	E	K	V	D	H	V	V	V	E	G	T	G	G	W	R
Query Conservation
Alig confidence										.	.	.	.	.
Template Conservation										.	.	.	.	.
Template Sequence		S	Y	S	A	A	E	F	R	.	.	.	.	.	A	D	A	L	A	A	M	A	K	A	T	A	R	G	R	I	P	L	L	V	G	G	T	M	L	Y
Template Known Secondary structure										.	.	.	.	.													T	T								S
Template Predicted Secondary structure										.	.	.	.	.
Template SS confidence
		73	.	.	.	.	.	.	80						.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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