Return to main results Retrieve Phyre Job Id

Job DescriptionP0A6E9
Confidence99.84%DateThu Jan 5 11:02:58 GMT 2012
Rank24Aligned Residues196
% Identity15%Templatec2wooC_
PDB info PDB header:hydrolaseChain: C: PDB Molecule:atpase get3; PDBTitle: nucleotide-free form of s. pombe get3
Resolution3.01 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50... ......60...
Predicted Secondary structure 

























..................
Query SS confidence 



















































. . . . . . . . . . . . . . . . . .









Query Sequence  LKRFFITGTDTSVGKTVVSRALLQALASQGKTVAGYKPVAKGSKETPEGLRN. . . . . . . . . . . . . . . . . . KDALVLQSVS
Query Conservation 

 
 
 

  







  

  

  
 


 

 
  
          ..................     
    
Alig confidence 







.










































..................









Template Conservation 



  

.









  

  

  
 





 

   
   

                               
Template Sequence  LKWIFVGG. KGGVGKTTTSCSLAIQMSKVRSSVLLISTDPAHNLSDAFGTKFGKDARKVPGFDNLSAMEIDPNLSIQEMT
Template Known Secondary structure 


.SSSSSTSSS


TT
SS


SS

TT
SS

Template Predicted Secondary structure 

.



































Template SS confidence 















































































   1920...... ...30.........40.........50.........60.........70.........80.........90.......
 
   64.....70.........80.........90.........100.........110.........120.........130...
Predicted Secondary structure 






























..........
Query SS confidence 





































































. . . . . . . . . .
Query Sequence  TIELPYEAVNPIALSEEESSVAHSCPINYTLISNGLANLTEKVDHVVVEGTGGWRSLMNDLRPLSEWVVQ. . . . . . . . . .
Query Conservation                                 
      
    
 



               
     ..........
Alig confidence 




















.......









































..........
Template Conservation                 
   
 .......               
 

 
  
    
  
                    
Template Sequence  EQALSGMMQDLAFTIPGIDEA. . . . . . . LAFAEILKQIKSMEFDCVIFDTAPTGHTLRFLNFPTVLEKALGKLGGLSSRF
Template Known Secondary structure  T

TTSTT.......T

S

SSS
TTTGGGTS
TT
Template Predicted Secondary structure 













.......













Template SS confidence 















































































   98.100.........110........ .120.........130.........140.........150.........160.........170
 
   134.....140.........150.........160.........170.......
Predicted Secondary structure  ....................................

















Query SS confidence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .











































Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . EQLPVLMVVGIQEGCINHALLTAQAIANDGLPLIGWVANRINPG
Query Conservation  ....................................       
                          
 
 
     
Alig confidence  ....................................











































Template Conservation                                             
  
   

    
    
   
     



     
Template Sequence  GPMINQMGSIMGQDLFGKMESMRANISEVNKQFKNPDLTTFVCVCISEFLSLYETERMIQELTSYEIDTHNIVVNQLLLD
Template Known Secondary structure 


TTT
TTTSST



Template Predicted Secondary structure 





















Template SS confidence 















































































   179180.........190.........200.........210.........220.........230.........240.........250........
 
   178 .180.........190.........200.....
Predicted Secondary structure 
...........








Query SS confidence 
. . . . . . . . . . .


























Query Sequence  L. . . . . . . . . . . AHYAEIIDVLGKKLPAPLIGELPYLPR
Query Conservation   ...........                 


 

    
Alig confidence 
...........


























Template Conservation                    
  
        
  

    
Template Sequence  PNTTCPQCMARRKMQQKYLAQIEELYEDFHVVKVPQVPA
Template Known Secondary structure  SS


TTTS

SS
Template Predicted Secondary structure 













Template SS confidence 






































   264.....270.........280.........290.........300..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions