Job Description P0A6E9 Confidence 94.08% Date Thu Jan 5 11:02:58 GMT 2012 Rank 315 Aligned Residues 95 % Identity 7% Template c2vbcA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:dengue 4 ns3 full-length protein; PDBTitle: crystal structure of the ns3 protease-helicase from dengue2 virus Resolution 3.15 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.		.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure																		.
Query SS confidence																		.
Query Sequence		K	R	F	F	I	T	G	T	D	T	S	V	G	K	T	V	.	V	S	R	A	L	L	Q	A	L	A	S	Q	G	K	T	V	A	G	Y	K	P	V	A	K	G	S	K	E	T	P	E	G	L	R	N	K	D	A	L	V	L	Q	S	V	S	T	I	E	L	P	Y	E	A	V	N	P	I	A	L	S	E	E	E
Query Conservation																		.
Alig confidence									.									.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation									.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	L	T	I	M	D	L	.	H	P	G	A	G	K	T	K	R	I	L	P	S	I	V	R	E	A	L	K	R	R	L	R	T	L	I	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	P	T	R	V	V	A	A	E	M	E	E	A	L	R	G	L	P	I	R	Y	Q	T	P	A	V	K	S	D	H
Template Known Secondary structure									.		T	T	T			T	T	T												T	T							.	.	.	.	.	.	.	.	.	.	.	.	.	.		S	S											T	T	T	S							T	T		S
Template Predicted Secondary structure									.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		187	.	.	190	.	.	.		.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.															.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.			.	.	.	.	.	.	.	.	110	.	.
Predicted Secondary structure																						.	.
Query SS confidence																						.	.
Query Sequence		S	S	V	A	H	S	C	P	I	N	Y	T	L	I	S	N	G	L	A	N	.	.	L	T	E	K	V	D	H	V	V	V	E
Query Conservation																						.	.
Alig confidence																						.	.
Template Conservation
Template Sequence		T	G	R	E	I	V	D	L	M	C	H	A	T	F	T	T	R	L	L	S	S	T	R	V	P	N	Y	N	L	I	V	M	D
Template Known Secondary structure				S	S																		S						S
Template Predicted Secondary structure
Template SS confidence
		252	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions