Job Description P0A6E9 Confidence 98.05% Date Thu Jan 5 11:02:58 GMT 2012 Rank 60 Aligned Residues 164 % Identity 14% Template c2npiB_ PDB info PDB header:transcription Chain: B: PDB Molecule:protein clp1; PDBTitle: clp1-atp-pcf11 complex Resolution 2.95 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.		.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50											.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
Predicted Secondary structure																														.																				.	.	.	.	.	.	.	.	.	.
Query SS confidence																														.																				.	.	.	.	.	.	.	.	.	.
Query Sequence		R	F	F	I	T	G	T	D	T	S	V	G	K	T	V	V	S	R	A	L	L	Q	A	L	A	S	Q	G	.	K	T	V	A	G	Y	K	P	V	A	K	G	S	K	E	T	P	E	G	.	.	.	.	.	.	.	.	.	.	L	R	N	K	D	A	L	V	L	Q	S	V	S	T	I	E	L	P	Y	E	A	V
Query Conservation																														.																				.	.	.	.	.	.	.	.	.	.
Alig confidence								.																						.																				.	.	.	.	.	.	.	.	.	.
Template Conservation								.
Template Sequence		R	V	V	I	V	G	.	G	S	Q	T	G	K	T	S	L	S	R	T	L	C	S	Y	A	L	K	F	N	A	Y	Q	P	L	Y	I	N	L	D	P	Q	Q	P	I	F	T	V	P	G	C	I	S	A	T	P	I	S	D	I	L	D	A	Q	L	P	T	W	G	Q	S	L	T	S	G	A	T	L	L	H	N	K
Template Known Secondary structure								.	S	T	T	S	S															T	T											T	T	S		S	B	S		T	T									S				T	T		T	T		S	B	B			S	S			S	S			B
Template Predicted Secondary structure								.
Template SS confidence
		125	.	.	.	.	130		.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.									.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
Predicted Secondary structure																																					.	.	.	.	.	.	.	.
Query SS confidence																																					.	.	.	.	.	.	.	.
Query Sequence		N	P	I	A	L	S	E	E	E	S	S	V	A	H	S	C	P	I	N	Y	T	L	I	S	N	G	L	A	N	L	T	E	K	V	D	.	.	.	.	.	.	.	.	H	V	V	V	E	G	T	G	G	W	R	S	L	M	N	D	L	R	P	L	S	E	W	V	V	Q	E	Q	L	P	V	L	M	V	V	G	I
Query Conservation																																					.	.	.	.	.	.	.	.
Alig confidence																																					.	.	.	.	.	.	.	.									.
Template Conservation																																																					.
Template Sequence		Q	P	X	V	K	N	F	G	L	E	R	I	N	E	N	K	D	L	Y	L	E	C	I	S	Q	L	G	Q	V	V	G	Q	R	L	H	L	D	P	Q	V	R	R	S	G	C	I	V	D	T	P	S	.	I	S	Q	L	D	E	N	L	A	E	L	H	H	I	I	E	K	L	N	V	N	I	X	L	V	L	C	S
Template Known Secondary structure										S	S	S	G	G	G																													S									.	G	G	G	S		T	T											T	T
Template Predicted Secondary structure																																																					.
Template SS confidence
		204	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.		.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.
		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	E	G	C	I	N	H	A	L	L	T	A	Q	A	I	A	N	D	G	L	P	L	I	G	W
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	T	D	P	L	W	E	K	V	K	K	T	F	G	P	E	L	G	N	N	N	I	F	F	I
Template Known Secondary structure		S	S																	G	G	G
Template Predicted Secondary structure
Template SS confidence
		283	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions