Job Description P0A6E9 Confidence 97.79% Date Thu Jan 5 11:02:58 GMT 2012 Rank 64 Aligned Residues 126 % Identity 18% Template c2h5eB_ PDB info PDB header:translation Chain: B: PDB Molecule:peptide chain release factor rf-3; PDBTitle: crystal structure of e.coli polypeptide release factor rf3 Resolution 2.80 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	R	F	F	I	T	G	T	D	T	S	V	G	K	T	V	V	S	R	A	L	L	Q	A	L	A	S	Q	G	K	T	V	A	G	Y	K	P	V	A	K	G	S	K	E	T	P	E	G	L	R	N	K	D	A	L	V	L	Q	S	V	S	T	I	E	L	P	Y	E	A	V	N	P	I	A	L	S	E	E	E	S
Query Conservation
Alig confidence									.											.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation									.											.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	T	F	A	I	I	S	.	H	P	D	A	G	K	T	T	I	T	.	.	.	.	E	K	V	L	L	F	G	Q	T	T	S	V	M	Q	F	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure									.		T	T	S	S						.	.	.	.										T	T						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure									.											.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		14	.	.	.	.	.	20		.	.	.	.	.	.	.	.	.	30					.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	V	A	H	S	C	P	I	N	Y	T	L	I	S	N	G	L	A	N	L	T	E	K	V	D	H	V	V	V	E	G	T	G	G	W	R	S	L	M	N	D	L	R	P	L	S	E	W	V	V	Q	E	Q	L	P	V	L	M	V	V	G	I	Q	E	G	C	I	N	H	A	L	L	T	A	Q	A	I	A	N	D
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	H	D	C	L	V	N	L	L	D	T	P	G	H	E	.	.	.	.	.	D	F	S	E	D	T	Y	R	T	L	T	A	V	D	C	C	L	M	V	I	D	A	A	K	G	V	E	D	R	T	R	K	L	M	E	V	T	R	L	R
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T											S	T	.	.	.	.	.	T									G	G	G		S								T	T	T		S												T	T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.
Template SS confidence
																						79	80	.	.	.	.	.	.	.	.	.	90	.	.	.						.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.		200	.
Predicted Secondary structure																																							.
Query SS confidence																																							.
Query Sequence		G	L	P	L	I	G	W	V	A	N	R	I	N	P	G	L	A	H	Y	A	E	I	I	D	V	L	G	K	K	L	P	A	P	L	I	G	E	.	L	P
Query Conservation																																							.
Alig confidence							.																																.
Template Conservation							.
Template Sequence		D	T	P	I	L	.	T	F	M	N	K	L	D	R	D	I	R	D	P	M	E	L	L	D	E	V	E	N	E	L	K	I	G	C	A	P	I	T	W	P
Template Known Secondary structure		T					.						T	T	S																							S
Template Predicted Secondary structure							.
Template SS confidence
		134	.	.	.	.		.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions