Job Description P0A6E9 Confidence 94.84% Date Thu Jan 5 11:02:58 GMT 2012 Rank 255 Aligned Residues 143 % Identity 14% Template c1d2eA_ PDB info PDB header:rna binding protein Chain: A: PDB Molecule:elongation factor tu (ef-tu); PDBTitle: crystal structure of mitochondrial ef-tu in complex with gdp Resolution 1.94 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	F	F	I	T	G	T	D	T	S	V	G	K	T	V	V	S	R	A	L	L	Q	A	L	A	S	Q	G	K	T	V	A	G	Y	K	P	V	A	K	G	S	K	E	T	P	E	G	L	R	N	K	D	A	L	V	L	Q	S	V	S	T	I	E	L	P	Y	E	A	V	N	P	I	A	L	S	E	E	E	S	S
Query Conservation
Alig confidence								.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																	.	.	.
Template Conservation								.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																	.	.	.
Template Sequence		N	V	G	T	I	G	.	H	V	D	H	G	K	T	T	L	T	A	A	I	T	K	I	L	A	E	G	G	G	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	F	K	K	Y	E	E	I	D	N	A	P	E	E	R	A	R	G	I	T	I	N	A	A	H	V	E	Y	S	T	A	A	.	.	.
Template Known Secondary structure							S	.	S	T	T	S	S															T	T	S	B	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										S							T	T													S	S	.	.	.
Template Predicted Secondary structure								.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																	.	.	.
Template SS confidence
		59	60	.	.	.	.		.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.																.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	A	H	S	C	P	I	N	Y	T	L	I	S	N	G	L	A	N	L	T	E	K	V	D	H	V	V	V	E	G	T	G	G	W	R	S	L	M	N	D	L	R	P	L	S	E	W	V	V	Q	E	Q	L	P	V	L	M	V	V	G	I	Q	E	G	C	I	N	H	A	L	L	T	A	Q	A	I	A	N	D	G
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	H	Y	A	H	T	D	C	P	.	.	.	.	.	G	H	A	D	Y	V	K	N	M	I	T	G	T	A	P	L	D	G	C	I	L	V	V	A	A	N	D	G	P	M	P	Q	T	R	E	H	L	L	L	A	R	Q	I	G
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									S	.	.	.	.	.	S											T	S	S			S								T	T	T		S														T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.
Template SS confidence
																								120	.	.	.	.	.	.	.	.						.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
		164	.	.	.	.	.	170	.	.	.	.	.			.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
Predicted Secondary structure														.	.
Query SS confidence														.	.
Query Sequence		L	P	L	I	G	W	V	A	N	R	I	N	.	.	P	G	L	A	H	Y	A	E	I	I	D	V	L	G	K	K	L
Query Conservation														.	.
Alig confidence														.	.
Template Conservation
Template Sequence		V	E	H	V	V	V	Y	V	N	K	A	D	A	V	Q	D	S	E	M	V	E	L	V	E	L	E	I	R	E	L	L
Template Known Secondary structure												G	G	G		S
Template Predicted Secondary structure
Template SS confidence
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions