Job Description P37355 Confidence 99.97% Date Thu Jan 5 11:55:32 GMT 2012 Rank 47 Aligned Residues 246 % Identity 15% Template c3u1tA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:dmma haloalkane dehalogenase; PDBTitle: haloalkane dehalogenase, dmma, of marine microbial origin Resolution 2.20 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.			.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																					.	.																							.
Query SS confidence																																					.	.																							.
Query Sequence		L	H	A	Q	A	K	H	G	K	P	G	L	P	W	L	V	F	L	H	G	F	S	G	D	C	H	E	W	Q	E	V	G	E	A	F	.	.	A	D	Y	S	R	L	Y	V	D	L	P	G	H	G	G	S	A	A	I	S	V	D	.	G	F	D	D	V	T	D	L	L	R	K	T	L	V	S	Y	N	I	L	D
Query Conservation																																					.	.																							.
Alig confidence						.					.	.																									.	.																							.
Template Conservation						.					.	.
Template Sequence		I	A	Y	V	.	D	E	G	S	.	.	G	Q	P	V	L	F	L	H	G	N	P	T	S	S	Y	L	W	R	N	I	I	P	Y	V	V	A	A	G	Y	R	A	V	A	P	D	L	I	G	X	G	D	S	A	K	P	D	I	E	Y	R	L	Q	D	H	V	A	Y	X	D	G	F	I	D	A	L	G	L	D	D
Template Known Secondary structure						.					.	.	S	S								T	T			G	G	G	G	T	T	T							T	T									T	T	S	T	T	S				S	S																			T			S
Template Predicted Secondary structure						.					.	.
Template SS confidence
		61	.	.	.		.	.	.	.			.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.											.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																							.	.	.	.	.	.	.	.	.	.
Query SS confidence																																							.	.	.	.	.	.	.	.	.	.
Query Sequence		F	W	L	V	G	Y	S	L	G	G	R	V	A	M	M	A	A	C	Q	G	L	A	G	L	C	G	V	I	V	E	G	G	H	P	G	L	Q	.	.	.	.	.	.	.	.	.	.	N	A	E	Q	R	A	E	R	Q	R	S	D	R	Q	W	V	Q	R	F	L	T	E	P	L	T	A	V	F	A	D	W	Y	Q
Query Conservation																																							.	.	.	.	.	.	.	.	.	.
Alig confidence																																							.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		X	V	L	V	I	H	D	W	G	S	V	I	G	X	R	H	A	R	L	N	P	D	R	V	A	A	V	A	F	X	E	A	L	V	P	P	A	L	P	X	P	S	Y	E	A	X	G	P	Q	L	G	P	L	F	R	D	L	R	T	A	D	V	G	E	K	X	V	L	D	G	N	F	F	V	E	T	I	L	P	E
Template Known Secondary structure																						T	T	T										S		T	T	T		S	B	S		S	G	G	G												T	S	T	T							T	T	T						T
Template Predicted Secondary structure
Template SS confidence
		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.										.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																									.	.	.	.	.	.	.	.	.																																.
Query SS confidence																																									.	.	.	.	.	.	.	.	.																																.
Query Sequence		Q	P	V	F	A	S	L	N	D	D	Q	R	R	E	L	V	A	L	R	S	N	N	N	G	A	T	L	A	A	M	L	E	A	T	S	L	A	V	Q	.	.	.	.	.	.	.	.	.	P	D	L	R	A	N	L	S	A	R	T	F	A	F	Y	Y	L	C	G	E	R	D	S	K	F	R	A	L	A	A	E	.
Query Conservation																																									.	.	.	.	.	.	.	.	.																																.
Alig confidence																																									.	.	.	.	.	.	.	.	.																																.
Template Conservation
Template Sequence		X	G	V	V	R	S	L	S	E	A	E	X	A	A	Y	R	A	P	F	P	T	R	Q	S	R	L	P	T	L	Q	W	P	R	E	V	P	I	G	G	E	P	A	F	A	E	A	E	V	L	K	N	G	E	W	L	X	A	S	P	I	P	K	L	L	F	H	A	E	P	G	A	L	A	P	K	P	V	V	D	Y
Template Known Secondary structure		T	S		S	S												T	T			S	T	G	G	G										S		B	T	T	B	S																			S											S	S	S
Template Predicted Secondary structure
Template SS confidence
		218	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.
							220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
Predicted Secondary structure		.	.	.	.	.
Query SS confidence		.	.	.	.	.
Query Sequence		.	.	.	.	.	L	A	A	D	C	H	V	I	P	R	A	G	H	N	A	H	R	E	N	P	A	G	V	I	A	S	L	A	Q	I	L	R
Query Conservation		.	.	.	.	.
Alig confidence		.	.	.	.	.
Template Conservation
Template Sequence		L	S	E	N	V	P	N	L	E	V	R	F	V	G	A	G	T	H	F	L	Q	E	D	H	P	H	L	I	G	Q	G	I	A	D	W	L	R
Template Known Secondary structure						S	T	T										S	S
Template Predicted Secondary structure
Template SS confidence
		298	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions