Return to main results Retrieve Phyre Job Id

Job DescriptionP37355
Confidence99.91%DateThu Jan 5 11:55:32 GMT 2012
Rank94Aligned Residues227
% Identity16%Templatec3qmwD_
PDB info PDB header:hydrolaseChain: D: PDB Molecule:thioesterase; PDBTitle: redj with peg molecule bound in the active site
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10.........20.........30........ .40.........50.... .....60.........70.. .......80
Predicted Secondary structure 















.










.





.





Query SS confidence 


































.















.

















.







Query Sequence  HAQAKHGKPGLPWLVFLHGFSGDCHEWQEVGEAFA. DYSRLYVDLPGHGGSA. AISVDGFDDVTDLLRKTL. VSYNILDF
Query Conservation 
     
    
 





              
 .   

  

 
 
 
 .                  .        
Alig confidence 


































.















.

















.







Template Conservation               
   

 

       
   
     
   
 

 
 
            
      
         
Template Sequence  AAEPPDPAAAPLRLVCFPYAGGTVSAFRGWQERLGDEVAVVPVQLPGRGLRLRERPYDTMEPLAEAVADALEEHRLTHDY
Template Known Secondary structure 





TTS
S

TT

GGGGTT
SS


TTSGGGTTS



STTT
SSS
Template Predicted Secondary structure 










































Template SS confidence 















































































   22.......30.........40.........50.........60.........70.........80.........90.........100.
 
   81........90.........100.........110.........120.........130.........140.........150.........160
Predicted Secondary structure 






























Query SS confidence 















































































Query Sequence  WLVGYSLGGRVAMMAACQGLAGLCGVIVEGGHPGLQNAEQRAERQRSDRQWVQRFLTEPLTAVFADWYQQPVFASLNDDQ
Query Conservation       
 
                 


                                                    
Alig confidence 












































.........

























Template Conservation   




 

 

   
                             .........                          
Template Sequence  ALFGHSMGALLAYEVACVLRRRGAPRPRHLFVSGSRAPHLYGDRA. . . . . . . . . DHTLSDTALREVIRDLGGLDDTLGAA
Template Known Secondary structure  TTT



S
S


GGG
SS

.........
TTS
TTS



Template Predicted Secondary structure 















.........










Template SS confidence 















































































   102.......110.........120.........130.........140...... ...150.........160.........170..
 
   161........170.........180.........190.........200.........210......... 220.........230....
Predicted Secondary structure 



















......









Query SS confidence 


























































. . . . . .














Query Sequence  RRELVALRSNNNGATLAAMLEATSLAVQPDLRANLSARTFAFYYLCGERDSKFRALAAE. . . . . . LAADCHVIPRAGHNA
Query Conservation                                       
  
 
 
 
  
         ......       
   

  
Alig confidence 





...........









































......














Template Conservation        ...........                       


   
  
                         


  
Template Sequence  YFDRRL. . . . . . . . . . . PVLRADLRACERYDWHPRPPLDCPTTAFSAAADPIATPEMVEAWRPYTTGSFLRRHLPGNHFF
Template Known Secondary structure  T...........S







BSS
TT
STT
TTGGGBSS
SS
TTG
Template Predicted Secondary structure  ...........























Template SS confidence 















































































   175....180 .........190.........200.........210.........220.........230.........240...
 
   235.... 240.........250
Predicted Secondary structure 
..
Query SS confidence 




. .










Query Sequence  HRENP. . AGVIASLAQIL
Query Conservation    
 
..      
  

Alig confidence 




..










Template Conservation      
    

  
   
Template Sequence  LNGGPSRDRLLAHLGTEL
Template Known Secondary structure  GGSS
Template Predicted Secondary structure 



Template SS confidence 

















   244.....250.........260.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions