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Job DescriptionP37355
Confidence99.84%DateThu Jan 5 11:55:32 GMT 2012
Rank116Aligned Residues185
% Identity15%Templatec3lp5A_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:putative cell surface hydrolase; PDBTitle: the crystal structure of the putative cell surface hydrolase from2 lactobacillus plantarum wcfs1
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  GKPGLPWLVFLHGFSGDCHEWQEVGEAFA. . DY. . . SRLYVDLPGHGGS. . . . . . . . . . . . . . . . . . . . . AAISVDGFDD
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Template Sequence  ATRMAP. VIMVPGSSASQNRFDSLITELGKETPKKHSVLKLTVQTDGTIKYSGSIAANDNEPFIVIGFANNRDGKANIDK
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Query Sequence  VTDLLRKTLVSY. . . . NILDFWLVGYSLGGRVAMMAACQGLAG. . . . . LCGVIVEGGHPGLQNAEQRAERQRSDRQWVQR
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Template Sequence  QAVWLNTAFKALVKTYHFNHFYALGHSNGGLIWTLFLERYLKESPKVHIDRLMTIASPYNMESTSTTAKTSMFKE. . . . .
Template Known Secondary structure  TTS

STTGGGSTT
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Query Sequence  FLTEPLTAVFADWYQQPVFASLNDDQRRELVALRSNNNGATLAAMLEATSLAVQPDLRANLSARTFAFYYLCGERDSKFR
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . LYRYRTGLPESLTVYSIAGTENYTSDGTVP
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   154.....160.........170.........180...
 
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Query Sequence  ALAAE. . . . . . . . . . . . LAADCHVIPRAGHNAHRENPAGVIASLAQILR
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Template Sequence  YNSVNYGKYIFQDQVKHFTEITVTGANTAHSDLPQNKQ. IVSLIRQYLL
Template Known Secondary structure  TTTTTSS
TTTTBSS

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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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