Job Description P37355 Confidence 100.00% Date Thu Jan 5 11:55:32 GMT 2012 Rank 33 Aligned Residues 246 % Identity 16% Template c3kdaB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:cftr inhibitory factor (cif); PDBTitle: crystal structure of the cftr inhibitory factor cif with the h269a2 mutation Resolution 1.50 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.		.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.			.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																						.																											.	.
Query SS confidence																																						.																											.	.
Query Sequence		L	H	A	Q	A	K	H	G	K	P	G	L	P	W	L	V	F	L	H	G	F	S	G	D	C	H	E	W	Q	E	V	G	E	A	F	A	.	D	Y	S	R	L	Y	V	D	L	P	G	H	G	G	S	A	A	I	S	V	D	G	F	D	D	V	.	.	T	D	L	L	R	K	T	L	V	S	Y	N	I	L	D
Query Conservation																																						.																											.	.
Alig confidence									.	.	.																											.																											.	.
Template Conservation									.	.	.
Template Sequence		L	H	Y	V	K	G	G	.	.	.	Q	G	P	L	V	M	L	V	H	G	F	G	Q	T	W	Y	E	W	H	Q	L	M	P	E	L	A	K	R	F	T	V	I	A	P	D	L	P	G	L	G	Q	S	E	P	P	K	T	G	Y	S	G	E	Q	V	A	V	Y	L	H	K	L	A	R	Q	F	S	P	D	R	P
Template Known Secondary structure									.	.	.		S	S								T	T			G	G	G	G	T	T						T	T	T	S								T	T	S	T	T					S	S		S	S																S	S	S	S
Template Predicted Secondary structure									.	.	.
Template SS confidence
		46	.	.	.	50	.	.				.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.																	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
Predicted Secondary structure																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		F	W	L	V	G	Y	S	L	G	G	R	V	A	M	M	A	A	C	Q	G	L	A	G	L	C	G	V	I	V	E	G	G	H	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	L	Q	N	A	E	Q	R	A	E	R	Q	R	S	D	R	Q	W	V	Q	R	F	L	T	E	P	L	T	A	V
Query Conservation																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		F	D	L	V	A	H	D	I	G	I	W	N	T	Y	P	M	V	V	K	N	Q	A	D	I	A	R	L	V	Y	M	E	A	P	I	P	D	A	R	I	Y	R	F	P	A	F	T	A	Q	G	E	S	L	V	W	H	F	S	F	F	A	A	D	D	R	L	A	E	T	L	I	A	G	K	E	R	F	F	L	E	H
Template Known Secondary structure								T					T	T							T	G	G	G								S	S			S	S	G	G	G	G	G	S		S			T	T				S	S	T								S	T	T							T	T
Template Predicted Secondary structure
Template SS confidence
		123	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
		144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																														.	.	.	.
Query SS confidence																																																																														.	.	.	.
Query Sequence		F	A	D	W	Y	Q	Q	P	V	F	A	S	L	N	D	D	Q	R	R	E	L	V	A	L	R	S	N	N	N	G	A	T	L	A	A	M	L	E	A	T	S	L	A	V	Q	P	D	L	R	A	N	L	S	A	R	T	F	A	F	Y	Y	L	C	G	E	R	D	S	K	F	R	A	L	A	A	E	.	.	.	.
Query Conservation																																																																														.	.	.	.
Alig confidence																																																																														.	.	.	.
Template Conservation
Template Sequence		F	I	K	S	H	A	S	N	T	E	V	F	S	E	R	L	L	D	L	Y	A	R	S	Y	A	K	P	H	S	L	N	A	S	F	E	Y	Y	R	A	L	N	E	S	V	R	Q	N	A	E	L	A	K	T	R	L	Q	M	P	T	M	T	L	A	G	G	G	A	G	G	M	G	T	F	Q	L	E	Q	M	K	A
Template Known Secondary structure						T		S	S	G	G	G	S													T	S													T												T	T	S		B		S									S	T	T			T	T								T
Template Predicted Secondary structure
Template SS confidence
		203	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.
				220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
Predicted Secondary structure		.	.
Query SS confidence		.	.
Query Sequence		.	.	L	A	A	D	C	H	V	I	P	R	A	G	H	N	A	H	R	E	N	P	A	G	V	I	A	S	L	A	Q	I	L	R
Query Conservation		.	.
Alig confidence		.	.
Template Conservation
Template Sequence		Y	A	E	D	V	E	G	H	V	L	P	G	C	G	H	W	L	P	E	E	C	A	A	P	M	N	R	L	V	I	D	F	L	S
Template Known Secondary structure		T	B	S	S							T	T			S						S													T
Template Predicted Secondary structure
Template SS confidence
		283	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions