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Job DescriptionP37355
Confidence99.66%DateThu Jan 5 11:55:32 GMT 2012
Rank132Aligned Residues214
% Identity13%Templatec3k2iA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:acyl-coenzyme a thioesterase 4; PDBTitle: human acyl-coenzyme a thioesterase 4
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   8.10.........20.........30.........40.........50.........60.........70....... ..80....
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Query Sequence  KHGKPGLPWLVFLHGFSGDCHEWQEVGEAFADYSRLYVDLPGHGGSAAISVDGFDDVTDLLRKTLVSYNI. . . LDFWLVG
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Template Sequence  PPGPGPFPGIIDIFGIGGGLLEYRASLLAGHGFATLALAYYNFEDLPNNMDNISLEYFEEAVCYMLQHPQVKGPGIGLLG
Template Known Secondary structure 
SSS

B


TT
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SSSTTS
SS
S
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   151........160.........170.........180.........190.........200.........210.........220.........230
 
   85....90.........100.........110.........120.........130.........140.........150.........160....
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Query Sequence  YSLGGRVAMMAACQGLAGLCGVIVEGGHPGLQNAEQRAERQRSDRQWVQRFLTEPLTAVFADWYQQPVFASLNDDQRREL
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Template Sequence  ISLGADICLSMASFLKN. VSATVSINGSGISGNTAINYKHSSIPPLGYDLRRIKVAFSGLVDIVDIRNALVG. . . . . . . .
Template Known Secondary structure  T
SS.S

SB

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B
GGG

TTS

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   231........240....... ..250.........260.........270.........280.........290.........300.
 
   165....170.........180.........190.........200.........210..... ....220.........230..
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Query Sequence  VALRSNNNGATLAAMLEATSLAVQPDLRANLSARTFAFYYLCGERDSKFRA. . . . . . . . . . . . LAAELAADCHVIPRAGH
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . GYKNPSMIPIEKAQGPILLIVGQDDHNWRSELYAQTVSERLQAHGKEKPQIICYPGTGH
Template Known Secondary structure  .....................GGGSTTB

GGG

S
TT
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TT

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   302.......310.........320.........330.........340.........350.........360
 
   233 ......240.........250.
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Query Sequence  N. . . . . . . . . . . . . . . . . . . . . . . . . . . . AHRENPAGVIASLAQILR
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Template Sequence  YIEPPYFPLCPASLHRLLNKHVIWGGEPRAHSKAQEDAWKQILAFFC
Template Known Secondary structure 


STT




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   361........370.........380.........390.........400.......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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