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Job DescriptionP37355
Confidence99.90%DateThu Jan 5 11:55:32 GMT 2012
Rank97Aligned Residues242
% Identity11%Templatec3ilsA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:aflatoxin biosynthesis polyketide synthase; PDBTitle: the thioesterase domain from pksa
Resolution1.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   910... ......20.........30.........40.........50.........60.........70.........80......
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Query Sequence  HGKPG. . LPWLVFLHGFSGDCHEWQEVGEAFADYSRLYVDLPGHGGSAAISVDGFDDVTDLLRKTLVSYNILDFWLVGYS
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Template Sequence  QGLPMVARKTLFMLPDGGGSAFSYASLPRLKSDTAVVGLNCPYARDPENMNCTHGAMIESFCNEIRRRQPRGPYHLGGWS
Template Known Secondary structure  S
TTTSS

TT

GGGGTTS


SSS
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GGG




SS

T
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   1858.1860.........1870.........1880.........1890.........1900.........1910.........1920.........1930.......
 
   87..90.........100.........110.........120.........130.........140.........150.........160......
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Query Sequence  LGGRVAMMAACQGLAGLCGVIVEGGHPGLQNAEQRAERQRSDRQWVQRFLTEPLTAVFADWYQQPVFASLNDDQRRELVA
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Template Sequence  SGGAFAYVVAEALVNQGEEVHSLIIIDAPIPQAMEQLPRAFYEHCNSIGLFATQPGASPDGSTEPPSYLIPHFTAVVDVM
Template Known Secondary structure  TT

S

SS






TTTTTTSSSS
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S


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   1938.1940.........1950.........1960.........1970.........1980.........1990.........2000.........2010.......
 
   167..170.........180.........190.........200.........210......... 220.........230.........
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Query Sequence  LRSNNNGATLAAMLEATSLAVQPDLRANLSARTFAFYYLCGERDSKFRALAAE. . . . . LAADCHVIPRAGHNAHRENP. .
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Template Sequence  LDYKLAPLHARRMPKVGIVWAADTVMDERDAPKMKGMHFMIQKRTEFGPDGWDTIMPGASFDIVRADGANHFTLMQKEHV
Template Known Secondary structure  TT







SS


SS
TTTS


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TTTS




S
TTSTT

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   2018.2020.........2030.........2040.........2050.........2060.........2070.........2080.........2090.......
 
   240.........250
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Query Sequence  AGVIASLAQIL
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Template Sequence  SIISDLIDRVM
Template Known Secondary structure  T
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   2098.2100........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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