Job Description P37355 Confidence 99.86% Date Thu Jan 5 11:55:32 GMT 2012 Rank 111 Aligned Residues 210 % Identity 15% Template c3fnbB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:acylaminoacyl peptidase smu_737; PDBTitle: crystal structure of acylaminoacyl peptidase smu_737 from2 streptococcus mutans ua159 Resolution 2.12 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.		.	.	30	.	.	.	.	.	.	.			.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.			.	.
Predicted Secondary structure																									.											.	.																																									.	.
Query SS confidence																									.											.	.																																									.	.
Query Sequence		A	Q	A	K	H	G	K	P	G	L	P	W	L	V	F	L	H	G	F	S	G	D	C	.	H	E	W	Q	E	V	G	E	A	F	.	.	A	D	Y	S	R	L	Y	V	D	L	P	G	H	G	G	S	A	A	I	S	V	D	G	F	D	D	V	T	D	L	L	R	K	T	L	V	S	Y	N	I	.	.	L	D
Query Conservation																									.											.	.																																									.	.
Alig confidence																									.											.	.																																									.	.
Template Conservation
Template Sequence		Y	A	I	I	S	E	D	K	A	Q	D	T	L	I	V	V	G	G	G	D	T	S	R	E	D	L	F	Y	X	L	G	Y	S	G	W	E	H	D	Y	N	V	L	X	V	D	L	P	G	Q	G	K	N	P	N	Q	G	L	H	F	E	V	D	A	R	A	A	I	S	A	I	L	D	W	Y	Q	A	P	T	E	K
Template Known Secondary structure							S	S												S	S										T							T	T									T	T	S	T	T	G	G	G	G	T					S		S														S	S	S
Template Predicted Secondary structure
Template SS confidence
		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	W	L	V	G	Y	S	L	G	G	R	V	A	M	M	A	A	C	Q	G	L	A	G	L	C	G	V	I	V	E	G	G	H	P	G	L	Q	N	A	E	Q	R	A	E	R	Q	R	S	D	R	Q	W	V	Q	R	F	L	T	E	P	L	T	A	V	F	A	D	W	Y	Q	Q	P	V	F	A	S	L	N	D	D
Query Conservation
Alig confidence																								.													.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																								.													.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	A	I	A	G	F	S	G	G	G	Y	F	T	A	Q	A	V	E	K	D	K	R	.	I	K	A	W	I	A	S	T	P	I	Y	D	.	.	.	.	.	.	.	.	.	.	.	.	V	A	E	V	F	R	I	S	F	S	V	N	K	V	A	E	V	N	L	N	K	Y	A	W	Q	F	G	Q	V	D	F	I	T
Template Known Secondary structure								T	T													T	T	.								S			S		.	.	.	.	.	.	.	.	.	.	.	.									T																		T	S	S
Template Predicted Secondary structure																								.													.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		227	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.		.	250	.	.	.	.	.	.	.	.	.	260													.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.											220	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																														.	.	.	.	.	.	.	.	.	.										.
Query SS confidence																																																														.	.	.	.	.	.	.	.	.	.										.
Query Sequence		Q	R	R	E	L	V	A	L	R	S	N	N	N	G	A	T	L	A	A	M	L	E	A	T	S	L	A	V	Q	P	D	L	R	A	N	L	S	A	R	T	F	A	F	Y	Y	L	C	G	E	R	D	S	K	F	R	A	L	A	A	E	.	.	.	.	.	.	.	.	.	.	L	A	A	D	C	H	V	I	P	.
Query Conservation																																																														.	.	.	.	.	.	.	.	.	.										.
Alig confidence										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.	.	.	.	.	.										.
Template Conservation										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	V	N	E	V	L	E	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	Q	I	V	D	Y	N	K	I	D	V	P	S	L	F	L	V	G	A	G	E	D	S	E	L	X	R	Q	S	Q	V	L	Y	D	N	F	K	Q	R	G	I	D	V	T	L	R	K	F	S	S
Template Known Secondary structure										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						G	G	G			S								S	S	S																		T	T										T
Template Predicted Secondary structure										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		313	.	.	.	.	.	.	320																							.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370
					229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250
Predicted Secondary structure		.	.	.
Query SS confidence		.	.	.
Query Sequence		.	.	.	R	A	G	H	N	A	H	R	E	N	P	A	G	V	I	A	S	L	A	Q	I	L
Query Conservation		.	.	.
Alig confidence		.	.	.						.
Template Conservation										.
Template Sequence		E	S	G	A	D	A	H	C	.	Q	V	N	N	F	R	L	X	H	Y	Q	V	F	E	W	L
Template Known Secondary structure		T	T	T			S	G	G	.	G	G	G	G
Template Predicted Secondary structure										.
Template SS confidence
		371	.	.	.	.	.	.	.		.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions