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Job DescriptionP37355
Confidence99.87%DateThu Jan 5 11:55:32 GMT 2012
Rank107Aligned Residues231
% Identity14%Templatec3fcyB_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:xylan esterase 1; PDBTitle: crystal structure of acetyl xylan esterase 1 from2 thermoanaerobacterium sp. jw/sl ys485
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   10.........20.........30........ .40.........50.........60.........70.........80........
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Query Sequence  GKPGLPWLVFLHGFSGDCHEWQEVGEAFA. DYSRLYVDLPGHGGSAAISVDGFDDVTDLLRKTLVSYNILDFWLVGYSLG
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Template Sequence  TEGKHPALIRFHGYSSNSGDWNDKLNYVAAGFTVVAMDVRGQGGQSQDVGGVTGNTLNGHIIRGLDDDADNMLFRHIFLD
Template Known Secondary structure 
SS


TT

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SGGGTTT


TTSSSS






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GGG
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   78.80.........90.........100.........110.........120.........130.........140.........150.......
 
   8990.........100.........110.........120.........130.........140.........150.........160........
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Query Sequence  GRVAMMAACQGLAGLCGVIVEGGHPGLQNAEQRAERQRSDRQWVQRFLTEPLTAVFADWYQQPVFASLNDDQRRELVALR
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Template Sequence  TAQLAGIVMNMPEVDEDRVGVMGPSQGGGLSLACAALEPRVRKVVSEYPFLSDYKRVWDLDLAKNAYQEITDYFRLFDPR
Template Known Secondary structure  TTSTTTSTT

S
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TT


GGG
TT
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   158.160.........170.........180.........190.........200.........210.........220.........230.......
 
   169170.........180.........190.........200.........210......... 220.........230.........240.
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Query Sequence  SNNNGATLAAMLEATSLAVQPDLRANLSARTFAFYYLCGERDSKFRALAAE. . . . . . . LAADCHVIPRAGHNAHRENPAG
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Template Sequence  HERENEVFTKL. . . . . . . GYIDVKNLAKRIKGDVLMCVGLMDQVCPPSTVFAAYNNIQSKKDIKVYPDYGH. . . . EPMRG
Template Known Secondary structure 
TT.......GGG
GGG

STT
SSS
T

SSTT

S....S

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   238.240........ .250.........260.........270.........280.........290.........300. .....
 
   242.......250.
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Query Sequence  VIASLAQILR
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Template Sequence  FGDLAMQFML
Template Known Secondary structure  G
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   307..310......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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