Job Description P37355 Confidence 99.65% Date Thu Jan 5 11:55:32 GMT 2012 Rank 134 Aligned Residues 189 % Identity 17% Template c3ds8A_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:lin2722 protein; PDBTitle: the crysatl structure of the gene lin2722 products from listeria2 innocua Resolution 1.80 Å

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		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.																		.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.							.	.	.	.	.	60	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.
Query SS confidence																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.
Query Sequence		G	L	P	W	L	V	F	L	H	G	F	S	G	D	C	H	E	W	Q	E	V	G	E	A	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	D	Y	S	R	L	Y	V	D	L	P	G	H	G	G	S	A	.	.	.	.	.	.	A	I	S	V	D	G	F	D	D	V	T	D	L	L	R
Query Conservation																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.
Alig confidence																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.
Template Conservation
Template Sequence		D	Q	I	P	I	I	L	I	H	G	S	G	G	N	A	S	S	L	D	K	X	A	D	Q	L	X	N	E	Y	R	S	S	N	E	A	L	T	X	T	V	N	S	E	G	K	I	K	F	E	G	K	L	T	K	D	A	K	R	P	I	I	K	F	G	F	E	Q	N	Q	A	T	P	D	D	W	S	K	W	L	K
Template Known Secondary structure												T	T			T	T	T	T										T	T													T	T	T						S				T	T		S	S								S	S	T	T	S
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		70	.	.	.	.	.					.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.						.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Predicted Secondary structure								.	.	.	.																											.	.	.	.	.
Query SS confidence								.	.	.	.																											.	.	.	.	.
Query Sequence		K	T	L	V	S	Y	.	.	.	.	N	I	L	D	F	W	L	V	G	Y	S	L	G	G	R	V	A	M	M	A	A	C	Q	G	L	A	.	.	.	.	.	G	L	C	G	V	I	V	E	G	G	H	P	G	L	Q	N	A	E	Q	R	A	E	R	Q	R	S	D	R	Q	W	V	Q	R	F	L	T	E	P	L
Query Conservation								.	.	.	.																											.	.	.	.	.
Alig confidence								.	.	.	.																											.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	A	X	E	D	L	K	S	R	Y	G	F	T	Q	X	D	G	V	G	H	S	N	G	G	L	A	L	T	Y	Y	A	E	D	Y	A	G	D	K	T	V	P	T	L	R	K	L	V	A	I	G	S	P	F	N	D	L	D	P	N	D	N	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure														S								T													S	T	T		T	T	S										S			T	T		S							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.							.	210	.	.	.	.
Predicted Secondary structure																																																																						.	.	.	.	.	.
Query SS confidence																																																																						.	.	.	.	.	.
Query Sequence		T	A	V	F	A	D	W	Y	Q	Q	P	V	F	A	S	L	N	D	D	Q	R	R	E	L	V	A	L	R	S	N	N	N	G	A	T	L	A	A	M	L	E	A	T	S	L	A	V	Q	P	D	L	R	A	N	L	S	A	R	T	F	A	F	Y	Y	L	C	G	E	.	.	.	.	.	.	R	D	S	K	F	R
Query Conservation																																																																						.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	X	D	L	S	F	K	K	L	P	N	S	T	P	Q	X	D	Y	F	I	K	N	Q	T	E	V	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	D	L	E	V	L	A	I	A	G	E	L	S	E	D	N	P	T	D	G	I	V	P
Template Known Secondary structure		.	.	.	.	.	.	S		T	T		S	S		S	S											T	G	G	G	S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T										S	B	T	T	B		B		S	S	S	B
Template Predicted Secondary structure		.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
								144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.																										170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
		215	.	.	.	.	220	.	.													.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
Predicted Secondary structure										.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence										.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	L	A	A	E	L	A	A	.	.	.	.	.	.	.	.	.	.	.	.	D	C	H	V	I	P	R	A	G	H	N	A	H	R	E	N	P	A	G	V	I	A	S	L	A	Q	I	L	R
Query Conservation										.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence										.	.	.	.	.	.	.	.	.	.	.	.																		.
Template Conservation																																							.
Template Sequence		T	I	S	S	L	A	T	R	L	F	X	P	G	S	A	K	A	Y	I	E	D	I	Q	V	G	E	D	A	V	H	Q	T	L	H	E	T	P	.	K	S	I	E	K	T	Y	W	F	L	E
Template Known Secondary structure						T	G	G	G	G	T	S	B	T	T	B	S									S	G	G	G		G	G	G	G	G	G	S		.
Template Predicted Secondary structure																																							.
Template SS confidence
		193	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.		230	.	.	.	.	.	.	.	.	.	240

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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