Job Description P37355 Confidence 99.96% Date Thu Jan 5 11:55:32 GMT 2012 Rank 72 Aligned Residues 234 % Identity 13% Template c3dqzB_ PDB info PDB header:lyase Chain: B: PDB Molecule:alpha-hydroxynitrile lyase-like protein; PDBTitle: structure of the hydroxynitrile lyase from arabidopsis2 thaliana Resolution 2.50 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.			.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.				60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
Predicted Secondary structure																										.	.																							.	.	.
Query SS confidence																										.	.																							.	.	.
Query Sequence		L	P	W	L	V	F	L	H	G	F	S	G	D	C	H	E	W	Q	E	V	G	E	A	F	.	.	A	D	Y	S	R	L	Y	V	D	L	P	G	H	G	G	S	A	A	I	S	V	D	.	.	.	G	F	D	D	V	T	D	L	L	R	K	T	L	V	S	Y	N	I	L	D	F	W	L	V	G	Y	S	L	G
Query Conservation																										.	.																							.	.	.
Alig confidence																										.	.																							.	.	.
Template Conservation
Template Sequence		K	H	H	F	V	L	V	H	N	A	Y	H	G	A	W	I	W	Y	K	L	K	P	L	L	E	S	A	G	H	R	V	T	A	V	E	L	A	A	S	G	I	D	P	R	P	I	Q	A	V	E	T	V	D	E	Y	S	K	P	L	I	E	T	L	K	S	L	P	E	N	E	E	V	I	L	V	G	F	S	F	G
Template Known Secondary structure											T	T			G	G	G	G	T	T								T	T									T	T	S	T	T		S	S		G	G	G			S														T	S		T	T									T	T
Template Predicted Secondary structure
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	R	V	A	M	M	A	A	C	Q	G	L	A	G	L	C	G	V	I	V	E	G	G	H	P	G	L	Q	N	A	E	Q	R	A	E	R	Q	R	S	D	R	Q	W	V	Q	R	F	L	T	E	P	L	T	A	V	F	A	D	W	Y	Q	Q	P	V	F	A	S	L	N	D	D	Q	R	R	E	L	V	A	L	R
Query Conservation
Alig confidence																																																						.	.	.	.	.
Template Conservation																																																						.	.	.	.	.
Template Sequence		G	I	N	I	A	L	A	A	D	I	F	P	A	K	I	K	V	L	V	F	L	N	A	F	L	P	D	T	T	H	V	P	S	H	V	L	D	K	Y	M	E	M	P	G	G	L	G	D	C	E	F	S	.	.	.	.	.	S	H	E	T	R	N	G	T	M	S	L	L	K	M	G	P	K	F	M	K	A	R	L
Template Known Secondary structure										T	T		G	G	G								S						S	S	S		T	T								T	S	T	T			T	T					.	.	.	.	.					T	T																	T
Template Predicted Secondary structure																																																						.	.	.	.	.
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.						.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.									.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.							220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
Predicted Secondary structure																						.	.	.	.	.	.	.	.																																.	.	.	.	.	.
Query SS confidence																						.	.	.	.	.	.	.	.																																.	.	.	.	.	.
Query Sequence		S	N	N	N	G	A	T	L	A	A	M	L	E	A	T	S	L	A	V	Q	.	.	.	.	.	.	.	.	P	D	L	R	A	N	L	S	A	R	T	F	A	F	Y	Y	L	C	G	E	R	D	S	K	F	R	A	L	A	A	E	.	.	.	.	.	.	L	A	A	D	C	H	V	I	P	R	A	G	H	N	A
Query Conservation																						.	.	.	.	.	.	.	.																																.	.	.	.	.	.
Alig confidence																						.	.	.	.	.	.	.	.																																.	.	.	.	.	.
Template Conservation
Template Sequence		Y	Q	N	C	P	I	E	D	Y	E	L	A	K	M	L	H	R	Q	G	S	F	F	T	E	D	L	S	K	K	E	K	F	S	E	E	G	Y	G	S	V	Q	R	V	Y	V	M	S	S	E	D	K	A	I	P	C	D	F	I	R	W	M	I	D	N	F	N	V	S	K	V	Y	E	I	D	G	G	D	H	M	V
Template Known Secondary structure		S	T	T	S										T	T													T	S					T	T	T	G	G	G	S								T	T		S	S	S												S			S						T	T			S
Template Predicted Secondary structure
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
		235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250		.	.
Predicted Secondary structure																		.
Query SS confidence																		.
Query Sequence		H	R	E	N	P	A	G	V	I	A	S	L	A	Q	I	L	.	R	F
Query Conservation																		.
Alig confidence																		.
Template Conservation
Template Sequence		M	L	S	K	P	Q	K	L	F	D	S	L	S	A	I	A	T	D	Y
Template Known Secondary structure					S
Template Predicted Secondary structure
Template SS confidence
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions