Job Description P37355 Confidence 94.51% Date Thu Jan 5 11:55:32 GMT 2012 Rank 260 Aligned Residues 116 % Identity 20% Template c3biwD_ PDB info PDB header:cell adhesion/cell adhesion Chain: D: PDB Molecule:neuroligin-1; PDBTitle: crystal structure of the neuroligin-1/neurexin-1beta synaptic adhesion2 complex Resolution 3.50 Å

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		1	.	.	.	.	.	.	.	.	10				.	.	.	.	.	.	.	.	.	20	.	.	.	.				.	.	.	.	.	30	.	.	.	.	.	.	.	.		.	40	.	.	.	.	.	.	.	.								.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.
Predicted Secondary structure												.	.	.															.	.	.															.											.	.	.	.	.	.	.
Query SS confidence												.	.	.															.	.	.															.											.	.	.	.	.	.	.
Query Sequence		M	I	L	H	A	Q	A	K	H	G	.	.	.	K	P	G	L	P	W	L	V	F	L	H	G	F	S	.	.	.	G	D	C	H	E	W	Q	E	V	G	E	A	F	A	.	D	Y	S	R	L	Y	V	D	L	P	.	.	.	.	.	.	.	G	H	G	G	S	A	A	I	S	V	D	G	F	D	D	V	T	D
Query Conservation												.	.	.															.	.	.															.											.	.	.	.	.	.	.
Alig confidence												.	.	.															.	.	.															.											.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	Y	L	N	I	Y	V	P	T	I	R	D	S	G	G	P	K	P	V	M	V	Y	I	H	G	G	S	Y	M	E	G	T	G	N	L	Y	D	G	S	V	L	A	S	Y	G	N	V	I	V	I	T	V	N	Y	R	L	G	V	L	G	F	L	S	T	G	D	Q	A	A	K	G	N	Y	G	L	L	D	L	I	Q
Template Known Secondary structure													S			S											S	S	S	S	S			T	T	T	S										T																	B		S	S	S	S		B
Template Predicted Secondary structure
Template SS confidence
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
		67	.	.	70	.	.	.	.	.	.	.						.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.				.	.	.	.	.	.	.	.	110	.	.	.	.	.	.
Predicted Secondary structure													.	.	.	.	.																									.	.	.
Query SS confidence													.	.	.	.	.																									.	.	.
Query Sequence		L	L	R	K	T	L	V	S	Y	N	I	.	.	.	.	.	L	D	F	W	L	V	G	Y	S	L	G	G	R	V	A	M	M	A	A	C	Q	G	L	A	.	.	.	G	L	C	G	V	I	V	E	G	G	H	P	G	L	Q
Query Conservation													.	.	.	.	.																									.	.	.
Alig confidence													.	.	.	.	.																									.	.	.
Template Conservation
Template Sequence		A	L	R	W	T	S	E	N	I	G	F	F	G	G	D	P	L	R	I	T	V	F	G	S	G	A	G	G	S	C	V	N	L	L	T	L	S	H	Y	S	E	K	G	L	F	Q	R	A	I	A	Q	S	G	T	A	L	S	S
Template Known Secondary structure										G	G	G	G	T												T										T	T	S	T	T	S		T	T	S								T			S	S	S	T
Template Predicted Secondary structure
Template SS confidence
		257	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions