Job Description P37355 Confidence 100.00% Date Thu Jan 5 11:55:32 GMT 2012 Rank 9 Aligned Residues 246 % Identity 13% Template c2wj4B_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:1h-3-hydroxy-4-oxoquinaldine 2,4-dioxygenase; PDBTitle: crystal structure of the cofactor-devoid 1-h-3-hydroxy-4-2 oxoquinaldine 2,4-dioxygenase (hod) from arthrobacter3 nitroguajacolicus ru61a anaerobically complexed with its4 natural substrate 1-h-3-hydroxy-4-oxoquinaldine Resolution 2.10 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.		.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure																																						.																						.
Query SS confidence																																						.																						.
Query Sequence		L	H	A	Q	A	K	H	G	K	P	G	L	P	W	L	V	F	L	H	G	F	S	G	D	C	H	E	W	Q	E	V	G	E	A	F	A	.	D	Y	S	R	L	Y	V	D	L	P	G	H	G	G	S	A	A	I	S	V	D	.	G	F	D	D	V	T	D	L	L	R	K	T	L	V	S	Y	N	I	L	D	F
Query Conservation																																						.																						.
Alig confidence																																						.																						.
Template Conservation
Template Sequence		L	S	Y	I	D	N	Q	R	D	T	D	G	P	A	I	L	L	L	P	G	W	C	H	D	H	R	V	Y	K	Y	L	I	Q	E	L	D	A	D	F	R	V	I	V	P	N	W	R	G	H	G	L	S	P	S	E	V	P	D	F	G	Y	Q	E	Q	V	K	D	A	L	E	I	L	D	Q	L	G	V	E	T	F
Template Known Secondary structure													S									T	T			G	G	G	G								T	T	T	S								T	T		S	S	S																								T			S
Template Predicted Secondary structure
Template SS confidence
		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.		.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																		.
Query SS confidence																		.
Query Sequence		W	L	V	G	Y	S	L	G	G	R	V	A	M	M	A	A	.	C	Q	G	L	A	G	L	C	G	V	I	V	E	G	G	H	P	G	L	Q	N	A	E	Q	R	A	E	R	Q	R	S	D	R	Q	W	V	Q	R	F	L	T	E	P	L	T	A	V	F	A	D	W	Y	Q	Q	P	V	F	A	S	L	N	D	D
Query Conservation																		.
Alig confidence																		.																																		.	.	.
Template Conservation																																																				.	.	.
Template Sequence		L	P	V	S	H	S	H	G	G	W	V	L	V	E	L	L	E	Q	A	G	P	E	R	A	P	R	G	I	I	M	D	W	L	M	W	A	P	K	P	D	F	A	K	S	L	T	L	L	K	D	.	.	.	P	E	R	W	R	E	G	T	H	G	L	F	D	V	W	L	D	G	H	D	E	K	R	V	R	H	H
Template Known Secondary structure							G	G	G																							S				S	S															.	.	.	T	T	T														T	T
Template Predicted Secondary structure																																																				.	.	.
Template SS confidence
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.				.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.							220	.	.	.	.	.	.	.	.	.	230	.	.	.
Predicted Secondary structure																																																														.	.	.	.	.	.
Query SS confidence																																																														.	.	.	.	.	.
Query Sequence		Q	R	R	E	L	V	A	L	R	S	N	N	N	G	A	T	L	A	A	M	L	E	A	T	S	L	A	V	Q	P	D	L	R	A	N	L	S	A	R	T	F	A	F	Y	Y	L	C	G	E	R	D	S	K	F	R	A	L	A	A	E	.	.	.	.	.	.	L	A	A	D	C	H	V	I	P	R	A	G	H	N
Query Conservation																																																														.	.	.	.	.	.
Alig confidence																																																														.	.	.	.	.	.
Template Conservation
Template Sequence		L	L	E	E	M	A	D	Y	G	Y	D	C	W	G	R	S	G	R	V	I	E	D	A	Y	G	R	N	G	S	P	M	Q	M	M	A	N	L	T	K	T	R	P	I	R	H	I	F	S	Q	P	T	E	P	E	Y	E	K	I	N	S	D	F	A	E	Q	H	P	W	F	S	Y	A	K	L	G	G	P	T	H	F
Template Known Secondary structure				T	T	T	T	T																						S							T		S	S											S		S															T	T									S	S	S
Template Predicted Secondary structure
Template SS confidence
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.
		234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	H	R	E	N	P	A	G	V	I	A	S	L	A	Q	I	L	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	A	I	D	V	P	D	R	A	A	V	H	I	R	E	F	A	T
Template Known Secondary structure						S
Template Predicted Secondary structure
Template SS confidence
		253	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions