Job Description P37355 Confidence 100.00% Date Thu Jan 5 11:55:32 GMT 2012 Rank 2 Aligned Residues 244 % Identity 12% Template c2qmqA_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:protein ndrg2; PDBTitle: crystal structure of a n-myc downstream regulated 2 protein (ndrg2,2 syld, ndr2, ai182517, au040374) from mus musculus at 1.70 a3 resolution Resolution 1.70 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30							.	.	.	.	.	.	.		.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.						60	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																															.	.	.	.	.	.								.																							.	.	.	.	.
Query SS confidence																															.	.	.	.	.	.								.																							.	.	.	.	.
Query Sequence		I	L	H	A	Q	A	K	H	G	K	P	G	L	P	W	L	V	F	L	H	G	F	S	G	D	C	H	E	W	.	.	.	.	.	.	Q	E	V	G	E	A	F	.	A	D	Y	S	R	L	Y	V	D	L	P	G	H	G	G	S	A	A	I	S	V	D	.	.	.	.	.	G	F	D	D	V	T	D	L	L	R
Query Conservation																															.	.	.	.	.	.								.																							.	.	.	.	.
Alig confidence																															.	.	.	.	.	.								.																							.	.	.	.	.
Template Conservation
Template Sequence		V	T	F	T	V	Y	G	T	P	K	P	K	R	P	A	I	F	T	Y	H	D	V	G	L	N	Y	K	S	C	F	Q	P	L	F	R	F	G	D	M	Q	E	I	I	Q	N	F	V	R	V	H	V	D	A	P	G	M	E	E	G	A	P	V	F	P	L	G	Y	Q	Y	P	S	L	D	Q	L	A	D	M	I	P
Template Known Secondary structure								S				T	T										T	T												T	S								T	T	S								T	T	T	S	T	T						T	T												T
Template Predicted Secondary structure
Template SS confidence
		50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.
		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	T	L	V	S	Y	N	I	L	D	F	W	L	V	G	Y	S	L	G	G	R	V	A	M	M	A	A	C	Q	G	L	A	G	L	C	G	V	I	V	E	G	G	H	P	G	L	Q	N	A	E	Q	R	A	E	R	Q	R	S	D	R	Q	W	V	Q	R	F	L	T	E	P	L	T	A	V	F	A	D	W	Y	Q
Query Conservation
Alig confidence																																																										.	.	.	.	.	.
Template Conservation																																																										.	.	.	.	.	.
Template Sequence		C	I	L	Q	Y	L	N	F	S	T	I	I	G	V	G	V	G	A	G	A	Y	I	L	S	R	Y	A	L	N	H	P	D	T	V	E	G	L	V	L	I	N	I	D	P	N	A	K	G	W	M	D	W	A	A	H	K	.	.	.	.	.	.	L	T	G	L	T	S	S	I	P	D	M	I	L	G	H	L	F	S
Template Known Secondary structure								T										T														G	G	G								S																.	.	.	.	.	.				T	T	S											S
Template Predicted Secondary structure																																																										.	.	.	.	.	.
Template SS confidence
		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.							.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190		.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.							220	.	.
Predicted Secondary structure																																											.																														.	.	.	.	.	.
Query SS confidence																																											.																														.	.	.	.	.	.
Query Sequence		Q	P	V	F	A	S	L	N	D	D	Q	R	R	E	L	V	A	L	R	S	N	N	N	G	A	T	L	A	A	M	L	E	A	T	S	L	A	V	Q	P	D	.	L	R	A	N	L	S	A	R	T	F	A	F	Y	Y	L	C	G	E	R	D	S	K	F	R	A	L	A	A	E	.	.	.	.	.	.	L	A	A
Query Conservation																																											.																														.	.	.	.	.	.
Alig confidence																																											.																														.	.	.	.	.	.
Template Conservation
Template Sequence		Q	E	E	L	S	G	N	S	E	L	I	Q	K	Y	R	G	I	I	Q	H	A	P	N	L	E	N	I	E	L	Y	W	N	S	Y	N	N	R	R	D	L	N	F	E	R	G	G	E	T	T	L	K	C	P	V	M	L	V	V	G	D	Q	A	P	H	E	D	A	V	V	E	C	N	S	K	L	D	P	T	Q	T
Template Known Secondary structure							T	T													T		T	T													T						S			T	T						S								T	T	S	T	T											S		G	G	G
Template Predicted Secondary structure
Template SS confidence
		204	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.
		223	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	C	H	V	I	P	R	A	G	H	N	A	H	R	E	N	P	A	G	V	I	A	S	L	A	Q	I	L	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	F	L	K	M	A	D	S	G	G	Q	P	Q	L	T	Q	P	G	K	L	T	E	A	F	K	Y	F	L	Q
Template Known Secondary structure							T	T		T	T
Template Predicted Secondary structure
Template SS confidence
		284	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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