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Job DescriptionP37355
Confidence99.96%DateThu Jan 5 11:55:32 GMT 2012
Rank80Aligned Residues229
% Identity17%Templatec2ockA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:valacyclovir hydrolase; PDBTitle: crystal structure of valacyclovir hydrolase d123n mutant
Resolution1.85 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30........ .40.........50......... 60.........70......
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Query Sequence  LHAQAKHGKPGLPWLVFLHGFSGDCHEWQEVGEAFA. . DYSRLYVDLPGHGGSAAISVD. . . . GFDDVTDLLRKTLVSYN
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Template Sequence  LHYQ. QTGEGDHAVLLLPGMLGSGETDFGPQLKNLNKKLFTVVAWDPRGYGHSRPPDRDFPADFFERDAKDAVDLMKALK
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   34... ..40.........50.........60.........70.........80.........90.........100.........110..
 
   77..80.........90.........100.........110.........120.........130.........140.........150......
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Query Sequence  ILDFWLVGYSLGGRVAMMAACQGLAGLCGVIVEGGHPGLQNAEQRAERQRSDRQWVQRFLTEPLTAVFADWYQQPVFASL
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Template Sequence  FKKVSLLGWSNGGITALIAAAKYPSYIHKMVIWGANAYVTDEDSMIYEGIRDVSKWSERTRKPLEALYGY. . . . . . . . . .
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   113......120.........130.........140.........150.........160.........170.........180..
 
   157..160.........170.........180.........190.........200.........210......... 220.........230
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Query Sequence  NDDQRRELVALRSNNNGATLAAMLEATSLAVQPDLRANLSARTFAFYYLCGERDSKFRALAAE. . . . . . LAADCHVIPRA
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Template Sequence  . . . . . . . . . DYFARTCEKWVDGIRQFKHLPDGNICRHLLPRVQCPALIVHGEKDPLVPRFHADFIHKHVKGSRLHLMPEG
Template Known Secondary structure  .........GGGGSGGGBSSTTTGGG

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   183......190.........200.........210.........220.........230.........240.........250...
 
   231........240.........250.
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Query Sequence  GHNAHRENPAGVIASLAQILR
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Template Sequence  KHNLHLRFADEFNKLAEDFLQ
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   254.....260.........270....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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