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Job DescriptionP37355
Confidence99.79%DateThu Jan 5 11:55:32 GMT 2012
Rank120Aligned Residues202
% Identity19%Templatec2hu7A_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:acylamino-acid-releasing enzyme; PDBTitle: binding of inhibitors by acylaminoacyl peptidase
Resolution2.01 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   5....10.........20.. .......30........ .40.........50... ......60.........70.
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Query Sequence  AQAKHGKPGLPWLVFLHG. . FSGDCHEWQEVGEAFA. . DYSRLYVDLPGHGGS. . . . . . . . . AAISVDGFDDVTDLLRKT
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Template Sequence  LESGRAPTPGPTVVLVHGGPFAEDSDSWDTFAASLAAAGFHVVMPNYRGSTGYGEEWRLKIIGDPCGGELEDVSAAARWA
Template Known Secondary structure  TTS
SS
SSSS



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T


TT
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TTTT
TTT
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   351........360.........370.........380.........390.........400.........410.........420.........430
 
   72.......80.........90.........100.........110.........120.........130.........140.........150.
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Query Sequence  LVSYNILDFWLVGYSLGGRVAMMAACQGLAGLCGVIVEGGHPGLQNAEQRAERQRSDRQWVQRFLTEPLTAVFADWYQQP
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Template Sequence  RESGLASELYIMGYSYGGYMTLCALTMKPGLFKAGVAGAS. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . VVDWE
Template Known Secondary structure  TT
TSTTSSSS
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   431........440.........450.........460.........470 .....
 
   152.......160.........170.........180.........190.........200.........210......... 220.
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Query Sequence  VFASLNDDQRRELVALRSNNNGATLAAMLEATSLAVQPDLRANLSARTFAFYYLCGERDSKFRALAAE. . . . . . . . . . LA
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Template Sequence  EMYELSDAAFRNFIEQLTGGSREIMRSR. . . . . . . . . . SPINHVDRIKEPLALIHPQNDSRTPLKPLLRLMGELLARGKT
Template Known Secondary structure  T


S
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GGG
GGG

S
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STT

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   476...480.........490.........500... ......510.........520.........530.........540.....
 
   222.......230.... .....240.........250.
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Query Sequence  ADCHVIPRAGHNA. HRENPAGVIASLAQILR
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Template Sequence  FEAHIIPDAGHAINTMEDAVKILLPAVFFLA
Template Known Secondary structure  TT

SS

B
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   546...550.........560.........570......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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