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Job DescriptionP37355
Confidence99.61%DateThu Jan 5 11:55:32 GMT 2012
Rank144Aligned Residues187
% Identity11%Templatec2ecfA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:dipeptidyl peptidase iv; PDBTitle: crystal structure of dipeptidyl aminopeptidase iv from2 stenotrophomonas maltophilia
Resolution2.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   15....20....... ..30....... ..40.........50..... ....60.........70...
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Query Sequence  PWLVFLHGFSGDC. . . . . . . . HEWQEVGEAF. . ADYSRLYVDLPGHGGSAA. . . . . . . . . . . ISVDGFDDVTDLLRKTLV
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Template Sequence  PVAVYVYGGPASQTVTDSWPGRGDHLFNQYLAQQGYVVFSLDNRGTPRRGRDFGGALYGKQGTVEVADQLRGVAWLKQQP
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STT

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STT


TT
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   518.520.........530.........540.........550.........560.........570.........580.........590.......
 
   74.....80.........90.........100.........110.........120.........130.........140.........150...
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Query Sequence  SYNILDFWLVGYSLGGRVAMMAACQGLAGLCGVIVEGGHPGLQNAEQRAERQRSDRQWVQRFLTEPLTAVFADWYQQPVF
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Template Sequence  WVDPARIGVQGWSNGGYMTLMLLAKASDSYACGVAGAPVTDWGLYDSHYTE. . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  TT
TTT
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   598.600.........610.........620.........630.........640........
 
   154.....160.........170.........180.........190.........200.........210......... 220...
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Query Sequence  ASLNDDQRRELVALRSNNNGATLAAMLEATSLAVQPDLRANLSARTFAFYYLCGERDSKFRALAAE. . . . . . . . . . LAAD
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Template Sequence  . . . . . . . . . . . . . . . . . . . . RYMDLPARNDAGYREARVLTHIEGLRSPLLLIHGMADDNVLFTNSTSLMSALQKRGQPFE
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TGGG
SGGGGGG

S
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   649650.........660.........670.........680.........690.........700........
 
   224.....230.........240.........250
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Query Sequence  CHVIPRAGHNAHRENPAGVIASLAQIL
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Template Sequence  LMTYPGAKHGLSGADALHRYRVAEAFL
Template Known Secondary structure  TT

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   709710.........720.........730.....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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