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Job DescriptionP37355
Confidence99.26%DateThu Jan 5 11:55:32 GMT 2012
Rank177Aligned Residues188
% Identity14%Templatec1xfdD_
PDB info PDB header:membrane proteinChain: D: PDB Molecule:dipeptidyl aminopeptidase-like protein 6; PDBTitle: structure of a human a-type potassium channel accelerating factor2 dppx, a member of the dipeptidyl aminopeptidase family
Resolution3.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   15....20....... ..30.........40.........50... ......60.........70.........
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Query Sequence  PWLVFLHGFSGDC. . . . . . . HEWQEVGEAFADYSRLYVDLPGHGGS. . . . . AAISVDGFDDVTDLLRKTLVSYNILD. . .
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Template Sequence  PLLLVVDGTPGSQSVAEKFEVSWETVMVSSHGAVVVKCDGRGSGFQGTKLLHEVRRRLGLLEEKDQMEAVRTMLKEQYID
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   623......630.........640.........650.........660.........670.........680.........690.........700..
 
   80.........90........ .100.........110.........120.........130.........140.........150..
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Query Sequence  . . . FWLVGYSLGGRVAMMAACQ. . . . GLAGLCGVIVEGGHPGLQNAEQRAERQRSDRQWVQRFLTEPLTAVFADWYQQPV
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Template Sequence  RTRVAVFGKDYGGYLSTYILPAKGENQGQTFTCGSALSPITDFKLYASA. . . . . . . . . . . . . . . . . . . . . FSERYLGLHG
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   703......710.........720.........730.........740.........750. ........760.
 
   153......160.........170.........180.........190......... 200.........210......... 220.
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Query Sequence  FASLNDDQRRELVALRSNNNGATLAAMLEATSLAVQPDLRANLSART. FAFYYLCGERDSKFRALAAE. . . . . . . . . . LA
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Template Sequence  LDNR. . . . . . . . . . . . . . . . . . . . . . . . . . . . AYEMTKVAHRVSALEEQQFLIIHPTADEKIHFQHTAELITQLIRGKAN
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   762... ....770.........780.........790.........800.........810...
 
   222.......230.. .......240.........250.
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Query Sequence  ADCHVIPRAGH. NAHRENPAGVIASLAQILR
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Template Sequence  YSLQIYPDESHYFTSSSLKQHLYRSIINFFV
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   814.....820.........830.........840....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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