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Job DescriptionP37355
Confidence98.50%DateThu Jan 5 11:55:32 GMT 2012
Rank231Aligned Residues205
% Identity12%Templatec1mpxB_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:alpha-amino acid ester hydrolase; PDBTitle: alpha-amino acid ester hydrolase labeled with selenomethionine
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   10.........20...... ...30....... ..40.........50...... ...60
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Query Sequence  GKPGLPWLVFLHGFSGD. . . . . . . . . . . CHEWQEVGEAF. . ADYSRLYVDLPGHGGSAAI. . . . . . . . . . . . . . . . SVDG
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Template Sequence  GAKNAPIVLTRTPYDASGRTERLASPHXKDLLSAGDDVFVEGGYIRVFQDVRGKYGSEGDYVXTRPLRGPLNPSEVDHAT
Template Known Secondary structure  T

SSS
T
SS

S
S
GGGTT

TTSTT

S


TT


SBTTB
SS

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   6970.........80.........90.........100.........110.........120.........130.........140........
 
   61........70.........80.........90.........100.........110.........120.........130.........140
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Query Sequence  FDDVTDLLRKTLVSYNILDFWLVGYSLGGRVAMMAACQGLAGLCGVIVEGGHPGLQNAEQRAERQRSDRQWVQRFLTEPL
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Template Sequence  DAWDTIDWLVKNVSESNGKVGXIGSSYEGFTVVXALTNPHPALKVAVPESPXIDGWXGDDWFNYGAFRQVNFDYFTGQLS
Template Known Secondary structure 
TTTTS

TTS



TTTTSSSTTBGGGS
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   149150.........160.........170.........180.........190.........200.........210.........220........
 
   141........150.........160.........170.........180.........190.... .....200.........210.
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Query Sequence  TAVFADWYQQPVFASLNDDQRRELVALRSNNNGATLAAMLEATSLAVQPDLRAN. . . . . . . . . LSARTFAFYYLCGERDS
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Template Sequence  KRGKGAGIARQGHDDYSNFLQAGSAGDFAKAAGLEQLPWWHKLTEHAAYDAFWQEQALDKVXARTPLKVPTXWLQGLWDQ
Template Known Secondary structure  SSS






SSS

STTGGGST
SS
TT
TS


S
TT
S
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   229230.........240.........250.........260.........270.........280.........290.........300........
 
   212..
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Query Sequence  KFR
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Template Sequence  EDX
Template Known Secondary structure  S
S
Template Predicted Secondary structure 


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   309310.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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