Return to main results Retrieve Phyre Job Id

Job DescriptionP36646
Confidence15.31%DateThu Jan 5 11:53:26 GMT 2012
Rank19Aligned Residues78
% Identity12%Templatec3ingA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:homoserine dehydrogenase; PDBTitle: crystal structure of homoserine dehydrogenase (np_394635.1) from2 thermoplasma acidophilum at 1.95 a resolution
Resolution1.95 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2930.........40.........50.........60.........70.. .......80.........90..
Predicted Secondary structure 











.............







...
Query SS confidence 











































. . . . . . . . . . . . .



















. . .
Query Sequence  TLLLMALQQQMVTPLSLKRIAINSAQWRGDKSAEVIHQLATLLK. . . . . . . . . . . . . AGLTLSEGLALLAEQHPSKQ. . .
Query Conservation    
   
   
     
                 
   

 

 .............


 
  

  
        ...
Alig confidence 


















..........














.............



















...
Template Conservation        

  
 






..........   
     
  

        





 




  
   
 

 
  
 
Template Sequence  YSLYRXAFESGXNVVTANK. . . . . . . . . . SGLANKWHDIXDSANQNSKYIRYEATVAGGVPLFSVLDYSILPSKVKRFRG
Template Known Secondary structure  TT



..........T


GGGSSTTS

T
TT

Template Predicted Secondary structure 






..........









Template SS confidence 















































































   99100.........110....... ..120.........130.........140.........150.........160........
 
   93......100.........110......
Predicted Secondary structure  .



Query SS confidence  .























Query Sequence  . WQALLQSLAHDLEQGIAFSNALLP
Query Conservation  .    
  
   
  
 


 

  
Alig confidence  .























Template Conservation 




 



     
  
 


 
Template Sequence  IVSSTINYVIRNXANGRSLRDVVDD
Template Known Secondary structure 

TT

Template Predicted Secondary structure 









Template SS confidence 
























   169170.........180.........190...
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions