Job Description P36646 Confidence 6.92% Date Thu Jan 5 11:53:26 GMT 2012 Rank 38 Aligned Residues 75 % Identity 15% Template c2zhhA_ PDB info PDB header:transcription Chain: A: PDB Molecule:redox-sensitive transcriptional activator soxr; PDBTitle: crystal structure of soxr Resolution 3.20 Å

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		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	L	L	L	M	A	L	Q	Q	Q	M	V	T	P	L	S	L	K	R	I	A	I	N	S	A	Q	W	R	G	D	K	S	A	E	V	I	H	Q	L	A	T	L	L	K	A	G	L	T	L	S	E	G	L	A	L	L	A	E	Q	H	P	S	K	Q	W	Q	A	L	L	Q	S	L	A	H	D	L	E	Q
Query Conservation
Alig confidence															.	.																					.
Template Conservation															.	.																					.
Template Sequence		V	S	A	L	H	F	Y	E	S	K	G	L	I	.	.	T	S	I	R	N	S	G	N	Q	R	R	Y	K	R	D	V	L	R	Y	V	.	A	I	I	K	I	A	Q	R	I	G	I	P	L	A	T	I	G	E	A	F	G	V	T	L	S	A	K	E	W	K	Q	L	S	S	Q	W	R	E	E	L	D	R
Template Known Secondary structure											T	T	S	S	.	.						T	T	T						T	T						.									T	T										T	T
Template Predicted Secondary structure															.	.																					.
Template SS confidence
		25	.	.	.	.	30	.	.	.	.	.	.	.			.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.		.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions