 |
Job Description | P36646 | Confidence | 4.53% | Date | Thu Jan 5 11:53:26 GMT 2012 |
Rank | 87 | Aligned Residues | 38 |
% Identity | 21% | Template | c2dhyA_ |
PDB info |
PDB header:immune system | Chain: A: PDB Molecule:cue domain-containing protein 1; |
PDBTitle: solution structure of the cue domain in the human cue2 domain containing protein 1 (cuedc1)
|
Resolution | UNK |
|
  |   |
108 | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | |
|
. | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  | . | . |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | A | F | S | N | A | L | L | P | W | S | E | V | F | P | P | L | Y | Q | A | M | I | R | . |
. |
T | G | E | L | T | G | K | L | D | E | C | C | F | E | L |
Query Conservation |   |
  |
|
|
|   |
|
|   |   |   |   |   |   |
|
|   |   |   |   |   |
|
|   | . | . |   |
|
|   |
|
|   |
|   |   |   |
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |   |   |
|   |   |   |
|
|   |
|
|
|   |   |
|   |   |
|
|   |   |
|
|   |   |   |   |
|   |
|   |   |
|
|
|   |
|
Template Sequence |   |
L | E | F | N | Q | A | M | D | D | F | K | T | M | F | P | N | M | D | Y | D | I | I | E | C | V | L | R | A | N | S | G | A | V | D | A | T | I | D | Q | L |
Template Known Secondary structure |   |
|
| S |  |  |  |  |  |  |  |  |  |  |
| S | S | S |
|  |  |  |  |  |  |  |  |  |  |  | T | S |
|  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
16 | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|