Return to main results Retrieve Phyre Job Id

Job DescriptionP39396
Confidence6.47%DateThu Jan 5 12:00:30 GMT 2012
Rank34Aligned Residues28
% Identity11%Templatec3pppA_
PDB info PDB header:transport proteinChain: A: PDB Molecule:glycine betaine/carnitine/choline-binding protein; PDBTitle: structures of the substrate-binding protein provide insights into the2 multiple compatible solutes binding specificities of bacillus3 subtilis abc transporter opuc
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   134.....140.........150.........160.
Predicted Secondary structure 




Query SS confidence 



























Query Sequence  DFMVLFISSRRNGASLGEMIKEEMGPVP
Query Conservation 

 

  


  







   

   
Alig confidence 



























Template Conservation   
  
   
         

  

  

Template Sequence  TMQELNYEVDGKLKEPSVVAKEFLEKHH
Template Known Secondary structure  TS


TG
Template Predicted Secondary structure 






Template SS confidence 



























   273......280.........290.........300
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions