Return to main results Retrieve Phyre Job Id

Job DescriptionP39396
Confidence4.68%DateThu Jan 5 12:00:30 GMT 2012
Rank62Aligned Residues11
% Identity36%Templatec2k1aA_
PDB info PDB header:cell adhesionChain: A: PDB Molecule:integrin alpha-iib; PDBTitle: bicelle-embedded integrin alpha(iib) transmembrane segment
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   120.........130
Predicted Secondary structure 
Query SS confidence 










Query Sequence  LWLLAGVVLAG
Query Conservation 





 

 
Alig confidence 










Template Conservation   







 
Template Sequence  IWWVLVGVLGG
Template Known Secondary structure 
Template Predicted Secondary structure 
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   966...970......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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