Return to main results Retrieve Phyre Job Id

Job DescriptionP39396
Confidence14.05%DateThu Jan 5 12:00:30 GMT 2012
Rank11Aligned Residues37
% Identity16%Templatec2jp3A_
PDB info PDB header:transcriptionChain: A: PDB Molecule:fxyd domain-containing ion transport regulator 4; PDBTitle: solution structure of the human fxyd4 (chif) protein in sds2 micelles
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   665....670.........680.........690.........700.
Predicted Secondary structure 










Query SS confidence 




































Query Sequence  AGLSILFLIVVYSIIFYGFKTWLAVRNSDKRTDKETP
Query Conservation    
 
                                
Alig confidence 




































Template Conservation 

 
 



 

 



 




   
 
       
Template Sequence  LIFGGLLCIAGIALALSGKCKCRRNHTPSSLPEKVTP
Template Known Secondary structure  TTT

TTTSTTTS
Template Predicted Secondary structure 




















Template SS confidence 




































   22.......30.........40.........50........
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions