Return to main results Retrieve Phyre Job Id

Job DescriptionP24228
Confidence100.00%DateThu Jan 5 11:41:22 GMT 2012
Rank3Aligned Residues439
% Identity28%Templated1w79a1
SCOP infobeta-lactamase/transpeptidase-like beta-lactamase/transpeptidase-like Dac-like
Resolution1.8

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   21........ 30.........40.........50.........60.........70.........80.........90.........
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Query Sequence  ANVDEYITQ. LPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKG
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Template Sequence  EDIDAILEDPALEGAVSGVVVVDTATGEELYSRDGGEQLLPASNMKLFTAAAALEVLGADHSFGTEVAAESAPGRRGEVQ
Template Known Secondary structure  TT
GGGTT
TTT

STT

B

GGGT
TT
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TTSS
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   7..10.........20.........30.........40.........50.........60.........70.........80......
 
   100.........110.........120.........130.........140.........150.........160......... 170...
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Query Sequence  DLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIV. . . . . . DRNC
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Template Sequence  DLYLVGRGDPTLSAEDLDAMAAEVAASGVRTVRGDLYADDTWFDSERLVDDWWPEDEPYAYSAQISALTVAHGERFDTGV
Template Known Secondary structure 

S
TT

TT


S

TTS
S

S
TTS
GGGTTBGGG



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   87..90.........100.........110.........120.........130.........140.........150.........160......
 
   174.....180.........190.........200.........210.........220.........230.........240.........250...
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Query Sequence  FSVSLYSAPKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGAS
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Template Sequence  TEVSVTPAAEGEPADVDLGAAEGYAELDNRAVTGAAGSANTLVIDR. . . PVGTNTIAVTGSLPADAAPVTALRTVDEPAA
Template Known Secondary structure 

STTSB

GGGTTTS


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   167..170.........180.........190.........200.........210.. .......220.........230.........240...
 
   254.....260.........270........ .280.........290.........300.........310.........320.........330.
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Query Sequence  YAGAILKDELKQAGITWSGTLLRQT. . QVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRA
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Template Sequence  LAGHLFEEALESNGVTVKGDVGLGGVPADWQDAEVLADHTSAELSEILVPFMKFSNNGHAEMLVKSIGQETAG. AGTWDA
Template Known Secondary structure  TT

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S

TT
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   244.....250.........260.........270.........280.........290.........300.........310...... ...320..
 
   332.......340.........350.........360.........370.........380.........390...... ...400......
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Query Sequence  GSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYD. . . . . GSLQYRAGLH
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Template Sequence  GLVGVEEALSG. LGVDTAGLVLNDGSGLSRGNLVTADTVVDLLGQAGSAPWAQTWSASLPVAGESDPFVGGTLANR. . MR
Template Known Secondary structure  .TT


TT
B
S
SSS
STT
BB
TSTTS
BTT
SSGGGTTS..ST
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   323......330... ......340.........350.........360.........370.........380.........390....... ..
 
   407..410.........420.........430.........440.........450.........460.........470..
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Query Sequence  QAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAFVQYLSGYAVEPADQRNRRIPLVRFESRLYKD
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Template Sequence  GTAAEGVVEAKTGTMSGVSALSGYVPGPEGE. LAFSIVNNGHSGPA. . . . . PLAVQDAIAVRLAEY
Template Known Secondary structure  TSTTTTT


TT

TT

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   400.........410.........420.........430 .........440.... .....450.........
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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