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Job DescriptionP24228
Confidence99.88%DateThu Jan 5 11:41:22 GMT 2012
Rank27Aligned Residues251
% Identity22%Templated1o7ea_
SCOP infobeta-lactamase/transpeptidase-like beta-lactamase/transpeptidase-like beta-Lactamase/D-ala carboxypeptidase
Resolution1.51

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  AANVDEYITQLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKG
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Template Sequence  ASDFAALEKAC. . AGRLGVTLLDTASGRRI. GHRQDERFPMCSTFKSMLAATVLSQAER. . . . . . . . . . . . . . . MPALLD
Template Known Secondary structure 

S..TSTTT

.STTS

GGGGTT...............
TTTTT
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Query Sequence  DLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLY
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Template Sequence  RRVPVGEADL. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure 

GGG
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Query Sequence  SAPKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAIL
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . LSHAPVTRRHAGKDM. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  ...........................
SS
TTGGGGTT......................................
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   103......110.......
 
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Query Sequence  KDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQI
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . TVRDLCRATIITSDNTAANLLFGVVG. . . . . . . . . . . . GPPAVTAF
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Query Sequence  LRQQAGVDIGNTI. . . . . IADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSL. QYRAGLHQAGVDGK
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Template Conservation     . 
   
                     
  
   

  
             
   
                   
Template Sequence  LRA. SGDTVSRSDRLEPELNSFAKGDPRDTTTPAAMAATLQRVVLGEVLQPASRQQLADWLIDNETGDACLRAGLGKRWR
Template Known Secondary structure  .T
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TTGGG

BTTB
TT
TSSSS
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TT
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   152.. .....160.........170.........180.........190.........200.........210.........220.........230
 
   414.....420. ........430.. .......440.........450.........460.........470
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Query Sequence  VSAKTGSL. QGVYNLAGFIT. TASGQRMAFVQYLSGYAVEPADQRNRRIPLVRFESRLY
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Template Sequence  VGDKTGSNGEDARNDIAVLWPVAGGAPWVLTAYLQAGAISYEQRASVLAQVGRIADRLI
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No model constructed - rank, confidence too low




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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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