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Job DescriptionP24228
Confidence99.93%DateThu Jan 5 11:41:22 GMT 2012
Rank9Aligned Residues253
% Identity21%Templated1hzoa_
SCOP infobeta-lactamase/transpeptidase-like beta-lactamase/transpeptidase-like beta-Lactamase/D-ala carboxypeptidase
Resolution1.75

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   23......30. ........40.........50.........60.........70.........80.........90.........100
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Query Sequence  VDEYITQLP. . AGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGD
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Template Sequence  IEEQLNTLEKYSQGRLGVALINTEDNSQI. TYRGEERFAMASTSKVMAVAAVLKA. . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  TSTTTT.STTS

GGGG.........................
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   2930.........40.........50....... ..60.........70.........80..
 
   101........110.........120.........130.........140.........150.........160.........170.........180
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Query Sequence  LVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYS
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . SEKQAGLLDKNITIKKSDLVAYSPITEKHLTTGM. . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  .......................STTGGG



GGG

S

TTGGG
TTT
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   84.....90.........100.........110.......
 
   181........190.........200.........210.........220.........230.........240.........250.........260
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Query Sequence  APKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILK
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   261........270.........280.........290.........300.........310.........320.........330.........340
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Query Sequence  DELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQIL
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . TLAELSAATLQYSDNTAMNKILDYLG. . . . . . . . . . . . GPAKVTQFA
Template Known Secondary structure  .................................T

T............S
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   118.120.........130.........140... ......150..
 
   341........350.. .......360.........370.........380.........390......... 400.........410....
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Query Sequence  RQQAGVDIGNTI. . . . . IADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSL. QYRAGLHQAGVDGKV
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Template Sequence  RS. INDVTYRLDRKEPELNTAIHGDPRDTTSPIAMAKSLQALTLGDALGQSQRQQLVTWLKGNTTGDNSIKAGLPKHWVV
Template Known Secondary structure  .TT
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TTGGG


TT

TT
TSSSS
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TTTGGGGS
TTS
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   153. .....160.........170.........180.........190.........200.........210.........220.........230.
 
   415....420. ........430.........440.........450.........460.........470......
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Query Sequence  SAKTGSL. QGVYNLAGFITTASGQRMAFVQYLSGYAVEPADQRNRRIPLVRFESRLYKDIYQN
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Template Sequence  GDKTGSGDYGTTNDIAVIWPENHAPLILVVYFTQ. . . QEQNAKYRKDIIAKAAEIVTKEISNS
Template Known Secondary structure  TTT
TTS


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   232.......240.........250.........260..... ....270.........280.........290.
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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