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Job DescriptionP24228
Confidence99.88%DateThu Jan 5 11:41:22 GMT 2012
Rank26Aligned Residues256
% Identity20%Templated1e25a_
SCOP infobeta-lactamase/transpeptidase-like beta-lactamase/transpeptidase-like beta-Lactamase/D-ala carboxypeptidase
Resolution1.9

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   23......30... ......40.........50.........60.........70.........80.........90.........100
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Query Sequence  VDEYITQLPAG. . ANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGD
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Template Sequence  LKEQIESIVIGKKATVGVAVWGPDDLE. PLLINPFEKFPMQSVFKLHLAMLVLHQVDQ. . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  TTSSS
TT
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STT


GGGT......................
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   2930.........40.........50..... ....60.........70.........80.....
 
   101........110.........120.........130.........140.........150.........160.........170.........180
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Query Sequence  LVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYS
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . GKLDLNQTVIVNRAKVLQNTWAPIMKAYQGD. . . . . . . . . . . . . . . . .
Template Known Secondary structure  ................................TSS
TT
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   87..90.........100.........110.......
 
   181........190.........200.........210.........220.........230.........240.........250.........260
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Query Sequence  APKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILK
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   261........270.........280.........290.........300.........310.........320.........330.........340
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Query Sequence  DELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQIL
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . EFSVPVQQLLQYSVSHSDNVACDLLFELVG. . . . . . . . . . . . GPAALHDYI
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   114.....120.........130.........140... ......150..
 
   341........350.. .......360.........370.........380.........390........ .400.........410....
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Query Sequence  RQQAGVDIGNTI. . . . . IADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGS. LQYRAGLHQAGVDGKV
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Template Conservation    . 
   
                     

 
 
  
  
      
          
                   
Template Sequence  QS. MGIKETAVVANEAQMHADDQVQYQNWTSMKGAAEILKKFEQKTQLSETSQALLWKWMVETTTGPERLKGLLPAGTVV
Template Known Secondary structure  .TT

SB





TTGGGGS
TT
SS
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TTSTTTTS
TT

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   153. .....160.........170.........180.........190.........200.........210.........220.........230.
 
   415....420.. .......430.........440.........450.........460.........470.....
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Query Sequence  SAKTGSLQ. . . . . . GVYNLAGFITTASGQRMAFVQYLSGYAVEPADQRNRRIPLVRFESRLYKDIYQ
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Template Sequence  AHKTGTSQIKAGKTAATNDLGIILLPDGRPLLVAVFVKDSAES. . . SRTNEAIIAQVAQTAYQFELK
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   232.......240.........250.........260.........270.... .....280.........290.....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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