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Job DescriptionP24228
Confidence99.86%DateThu Jan 5 11:41:22 GMT 2012
Rank32Aligned Residues247
% Identity18%Templated1djaa_
SCOP infobeta-lactamase/transpeptidase-like beta-lactamase/transpeptidase-like beta-Lactamase/D-ala carboxypeptidase
Resolution1.90

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   22.......30.........40.........50.........60.........70.........80.........90.........100.
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Query Sequence  NVDEYITQLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDL
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Template Sequence  ELNDLEKKY. . NAHIGVYALDTKSGKEV. KFNSDKRFAYASTSHAINSAILLEQVPY. . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  ..T
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   32.......40 .........50....... ..60.........70.........80.....
 
   102.......110.........120.........130.........140.........150.........160.........170.........180.
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Query Sequence  VARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSA
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . NKLNKKVHINKDDIVAYSPILEKYVGKDI. . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  ...........................GGTT


GGG

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   8990.........100.........110.......
 
   182.......190.........200.........210.........220.........230.........240.........250.........260.
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Query Sequence  PKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKD
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   262.......270.........280.........290.........300.........310.........320.........330.........340.
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Query Sequence  ELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILR
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . TLKALIEASMTYSDNTANNKIIKEIG. . . . . . . . . . . . GIKKVKQRLK
Template Known Secondary structure  ................................S

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   118.120.........130.........140... ......150...
 
   342.......350.. .......360.........370.........380.........390........ .400.........410.....
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Query Sequence  QQAGVDIGNTI. . . . . IADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGS. LQYRAGLHQAGVDGKVS
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Template Sequence  E. LGDKVTNPVRYEIELNYYSPKSKKDTSTPAAFGKTLNKLIANGKLSKENKKFLLDLMLNNKSGDTLIKDGVPKDYKVA
Template Known Secondary structure  .TT

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TTGGG


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TT
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TT
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   154 .....160.........170.........180.........190.........200.........210.........220.........230..
 
   416...420... ......430........ .440.........450.........460.........470...
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Query Sequence  AKTGSLQG. . VYNLAGFITTASGQR. MAFVQYLSGYAVEPADQRNRRIPLVRFESRLYKDI
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Template Sequence  DKSGQAITYASRNDVAFVYPKGQSEPIVLVIFTNKDNKS. . . DKPNDKLISETAKSVMKEF
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   233......240.........250.........260.........270. ........280.........290
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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