Job Description P24228 Confidence 95.40% Date Thu Jan 5 11:41:22 GMT 2012 Rank 68 Aligned Residues 131 % Identity 21% Template c3fwlA_ PDB info PDB header:transferase, hydrolase Chain: A: PDB Molecule:penicillin-binding protein 1b; PDBTitle: crystal structure of the full-length transglycosylase pbp1b2 from escherichia coli Resolution 3.09 Å

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		299	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	K	I	M	L	K	K	S	D	N	M	I	A	D	T	V	F	R	M	I	G	H	A	R	F	N	V	P	G	T	W	R	A	G	S	D	A	V	R	Q	I	L	R	Q	Q	A	G	V	D	I	G	N	T	I	I	A	D	G	S	G	L	S	R	H	N	L	I	A	P	A	T	M	M	Q	V	L	Q	Y	I	A
Query Conservation
Alig confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.											.																					.
Template Conservation																							.	.	.	.	.	.	.	.	.	.	.	.	.											.																					.
Template Sequence		L	V	D	A	L	T	R	S	X	N	V	P	T	V	N	L	G	X	A	L	G	.	.	.	.	.	.	.	.	.	.	.	.	.	L	P	A	V	T	E	T	W	I	K	.	L	G	V	P	K	D	Q	L	H	P	V	P	A	X	L	L	G	A	L	N	.	L	T	P	I	E	V	A	Q	A	F	Q	T	I	A
Template Known Secondary structure								T	T		S												.	.	.	.	.	.	.	.	.	.	.	.	.											.		T			G	G	G				S	T					T				.
Template Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.	.	.											.																					.
Template SS confidence
		565	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.														.	.	.	.	590	.	.	.	.	.		.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.		.	.	.	.	620	.	.	.	.	.	.	.	.	.
		379	380	.	.	.	.	.																																		.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.			.
Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																						.	.
Query SS confidence									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																						.	.
Query Sequence		Q	H	D	N	E	L	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	I	S	M	L	P	L	A	G	Y	D	G	S	L	Q	Y	R	A	G	L	H	Q	A	G	V	D	G	K	V	S	A	K	T	G	S	L	Q	.	.	G
Query Conservation									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																						.	.
Alig confidence									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.																			.	.
Template Conservation																																																										.	.	.
Template Sequence		S	G	G	N	R	A	P	L	S	A	L	R	S	V	I	A	E	D	G	K	V	L	Y	Q	S	F	P	Q	A	E	R	A	V	P	A	Q	A	A	Y	L	T	L	W	T	X	Q	Q	V	V	Q	R	G	T	G	R	Q	.	.	.	L	G	A	K	Y	P	N	L	H	L	A	G	K	T	G	T	T	N	N	N	V
Template Known Secondary structure		T	T	S						B	S							S	S	S														S																		T	S	T	T			.	.	.						T	T	S										G	G	G	S
Template Predicted Secondary structure																																																										.	.	.
Template SS confidence
		630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.				.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.
		424	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	Y	N	L	A	G	F	I	T	T	A	S	G	Q	R	M	A	F	V	Q	Y	L	S	G	Y	A	V	E
Query Conservation
Alig confidence									.	.	.	.
Template Conservation									.	.	.	.
Template Sequence		D	T	W	F	A	G	I	.	.	.	.	D	G	S	T	V	T	I	T	W	V	G	R	D	N	N	Q	P
Template Known Secondary structure									.	.	.	.		S	S										T	T
Template Predicted Secondary structure									.	.	.	.
Template SS confidence
		707	.	.	710	.	.	.					.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions