Job Description P24228 Confidence 47.31% Date Thu Jan 5 11:41:22 GMT 2012 Rank 109 Aligned Residues 94 % Identity 27% Template c3cw4A_ PDB info PDB header:transferase Chain: A: PDB Molecule:polymerase basic protein 2; PDBTitle: large c-terminal domain of influenza a virus rna-dependent polymerase2 pb2 Resolution 2.70 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	R	F	S	R	F	I	I	G	L	T	S	C	I	A	F	S	V	Q	A	A	N	V	D	E	Y	I	T	Q	L	P	A	G	A	N	L	A	L	M	V	Q	K	V	G	A	S	A	P	A	I	D	Y	H	S	Q	Q	M	A	L	P	A	S	T	Q	K	V	I	T	A	L	A	A	L	I	Q	L	G	P	D	F
Query Conservation
Alig confidence																																				.	.						.														.	.	.	.	.	.	.	.						.	.	.	.	.	.
Template Conservation																																				.	.						.														.	.	.	.	.	.	.	.						.	.	.	.	.	.
Template Sequence		F	D	T	A	Q	I	I	K	L	L	P	F	A	A	A	P	P	K	Q	S	R	M	Q	F	S	S	F	T	V	N	V	R	G	S	.	.	G	M	R	I	L	.	V	R	G	N	S	P	V	F	N	Y	N	K	A	.	.	.	.	.	.	.	.	T	K	R	L	T	.	.	.	.	.	.	V	L	G	K	D	A
Template Known Secondary structure											G	G	G	G	S	S										S							S	S	S	.	.						.	S	S	S		B	T	T	B				S	S	.	.	.	.	.	.	.	.	S					.	.	.	.	.	.	S	S	S	S
Template Predicted Secondary structure																																				.	.						.														.	.	.	.	.	.	.	.						.	.	.	.	.	.
Template SS confidence
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.			110	.	.	.	.		.	.	.	.	.	120	.	.	.	.	.	.	.									.	.	130	.	.							.	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.			.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.
Predicted Secondary structure													.	.
Query SS confidence													.	.
Query Sequence		R	F	T	T	T	L	E	T	K	G	N	.	.	V	E	N	G	V	L	K	G	D	L	V	A	R	F	G	A	D	P	T	L	K
Query Conservation													.	.
Alig confidence													.	.													.
Template Conservation																											.
Template Sequence		G	T	L	T	E	D	P	D	E	G	T	A	G	V	E	S	A	V	L	R	G	F	L	I	L	.	G	K	E	D	K	R	Y	G
Template Known Secondary structure								T	T				S	S		B	S	S	S	S	T	T					.					G	G	G
Template Predicted Secondary structure																											.
Template SS confidence
		139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.		.	.	.	.	.	.	170	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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