 |
Job Description | P24228 | Confidence | 30.44% | Date | Thu Jan 5 11:41:22 GMT 2012 |
Rank | 124 | Aligned Residues | 58 |
% Identity | 14% | Template | c3blpX_ |
PDB info |
PDB header:hydrolase | Chain: X: PDB Molecule:alpha-amylase 1; |
PDBTitle: role of aromatic residues in human salivary alpha-amylase
|
Resolution | 1.60 Å |
|
 |
  |   |
108 | . | 110 | . | |
. | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | |
|
|
|
|
. | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
| . |
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |
|
|  |  |  |  | . | . | . | . | . |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
D | P | T | L | . |
K | R | Q | D | I | R | N | M | V | A | T | L | K | K | S | G | V | N | Q | I | D | G | N | V | L | I | . |
. |
. |
. |
. |
D | T | S | I | F | A | S | H | D | K | A | P | G | W | P | W | N | D | M | T | Q | C | F | S | A | P | P | A | A |
Query Conservation |   |
|
|   |
| . |   |   |   |   |
|   |   |
|   |   |   |
|   |   |   |
|
|   |   |
|   |
|   |
|
|   | . | . | . | . | . |
|   |
|   |
|   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |
|   |
|   |   |   |   |
Alig confidence |   |
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |
|
|   |   |
|
|
|   |
|
|   |   |
|
|   |   |
|
|   |
|
|
| . |
|
|
|   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
C | T | R | S | G | N | E | D | E | F | R | N | M | V | T | R | C | N | N | V | G | V | R | I | Y | V | . |
D | A | V | I | N | H | M | C | G | N | A | V | S | A | G | T | S | S | T | C | G | S | Y | F | N | P | G | S | R | D | F | P | A | V | P | Y | S | G |
Template Known Secondary structure |   |
| B | T | T | B |
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  | . |  |  |
|
| S |  |  |  |  | T | T | S |
| S | B | S |
| B | T | T |
|
|
| B | B | G | G | G | T | B | B | T | T | T | T | B |
| G |
Template Predicted Secondary structure |   |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  | . |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | |
. | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|