Job Description P24228 Confidence 93.97% Date Thu Jan 5 11:41:22 GMT 2012 Rank 74 Aligned Residues 131 % Identity 21% Template c2olvA_ PDB info PDB header:transferase Chain: A: PDB Molecule:penicillin-binding protein 2; PDBTitle: structural insight into the transglycosylation step of bacterial cell2 wall biosynthesis : donor ligand complex Resolution 2.80 Å

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		299	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.		.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.
Predicted Secondary structure																																																			.
Query SS confidence																																																			.
Query Sequence		L	K	I	M	L	K	K	S	D	N	M	I	A	D	T	V	F	R	M	I	G	H	A	R	F	N	V	P	G	T	W	R	A	G	S	D	A	V	R	Q	I	L	R	Q	Q	A	G	V	D	.	I	G	N	T	I	I	A	D	G	S	G	L	S	R	H	N	L	I	A	P	A	T	M	M	Q	V	L	Q	Y	I
Query Conservation																																																			.
Alig confidence																										.	.	.	.	.	.	.	.	.												.					.														.
Template Conservation																										.	.	.	.	.	.	.	.	.												.																			.
Template Sequence		I	Y	D	A	L	R	Q	S	F	N	I	P	A	L	K	A	W	Q	S	V	K	Q	N	A	.	.	.	.	.	.	.	.	.	G	N	D	A	P	K	K	F	A	A	K	.	L	G	L	N	Y	E	G	D	I	G	P	S	E	V	L	G	G	S	.	A	S	E	F	S	P	T	Q	L	A	S	A	F	A	A	I
Template Known Secondary structure								T	T																T	.	.	.	.	.	.	.	.	.		T	T								T	.	T	T				S	S								T	T		T	.	T
Template Predicted Secondary structure																										.	.	.	.	.	.	.	.	.												.																			.
Template SS confidence
		447	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470										.	.	.	.	.	.	.	.	.	480	.		.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.		500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.
		378	.	380	.	.	.																												.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.		.	.	.	.	.	.	.	420
Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.									.	.	.	.	.	.	.	.	.
Query SS confidence								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.									.	.	.	.	.	.	.	.	.
Query Sequence		A	Q	H	D	N	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	N	F	I	S	M	L	P	L	A	G	Y	D	G	S	L	Q	Y	R	A	G	L	H	Q	A	G	V	D	G	.	K	V	S	A	K	T	G	S	.	.	.	.	.	.	.	.	.
Query Conservation								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.									.	.	.	.	.	.	.	.	.
Alig confidence								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.									.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	N	G	G	T	Y	N	N	A	H	S	I	Q	K	V	V	T	R	D	G	E	T	I	E	Y	D	H	T	S	H	K	A	X	S	D	Y	T	A	Y	X	L	A	E	X	L	K	G	T	F	K	P	Y	G	S	A	Y	G	H	G	V	S	G	V	N	X	G	A	K	T	G	T	G	T	Y	G	A	E	T	Y	S
Template Known Secondary structure			T	T	S						B								T	T	S													S													G	G	G	S	S	T	T	S	T	T	T	T				S	S
Template Predicted Secondary structure
Template SS confidence
		516	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.
							421	.	.	.	.	.			.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.							.	.
Query SS confidence		.	.	.	.	.							.	.
Query Sequence		.	.	.	.	.	L	Q	G	V	Y	N	.	.	L	A	G	F	I	T	T	A	S	G	Q	R	M	A	F	V	Q	Y	L
Query Conservation		.	.	.	.	.							.	.
Alig confidence		.	.	.	.	.							.	.					.	.	.	.	.
Template Conservation																			.	.	.	.	.
Template Sequence		Q	Y	N	L	P	D	N	A	A	K	D	V	W	I	N	G	F	.	.	.	.	.	T	P	Q	Y	T	X	S	V	W	X
Template Known Secondary structure			T	T			T	T			S								.	.	.	.	.		S	S
Template Predicted Secondary structure																			.	.	.	.	.
Template SS confidence
		596	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.						.	.	.	.	.	.	.	620	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions