 |
Job Description | P24228 | Confidence | 36.29% | Date | Thu Jan 5 11:41:22 GMT 2012 |
Rank | 116 | Aligned Residues | 28 |
% Identity | 21% | Template | c1ud8A_ |
PDB info |
PDB header:hydrolase | Chain: A: PDB Molecule:amylase; |
PDBTitle: crystal structure of amyk38 with lithium ion
|
Resolution | 2.88 Å |
|
  |   |
106 | . | . | . | 110 | . | . | |
. | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
| . |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |
|
|  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | A | D | P | T | L | K | . |
R | Q | D | I | R | N | M | V | A | T | L | K | K | S | G | V | N | Q | I | D | G | N | V | L | I | D |
Query Conservation |   |
  |
|
|
|   |
|   | . |   |   |   |
|   |   |
|   |   |   |
|   |   |   |
|
|   |   |
|   |
|   |
|
|   |
|
Alig confidence |   |
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
Template Conservation |   |
  |
|
|   |   |   |
|
|   |   |
|
|
|   |
|
|   |   |
|
|   |   |
|
|   | . | . | . | . | . |
|
|
|
|
Template Sequence |   |
T | V | R | T | K | Y | G | T | K | A | Q | L | E | R | A | I | G | S | L | K | S | N | D | I | N | . |
. |
. |
. |
. |
V | Y | G | D |
Template Known Secondary structure |   |
B | S | S |
| S | S |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|  | . | . | . | . | . |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  | . | . | . | . | . |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
72 | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | |
|
|
|
|
. | . | . | 100 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|