Return to main results Retrieve Phyre Job Id

Job DescriptionP24228
Confidence36.29%DateThu Jan 5 11:41:22 GMT 2012
Rank116Aligned Residues28
% Identity21%Templatec1ud8A_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:amylase; PDBTitle: crystal structure of amyk38 with lithium ion
Resolution2.88 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   106...110.. .......120.........130........
Predicted Secondary structure 






.





Query SS confidence 






.

























Query Sequence  GADPTLK. RQDIRNMVATLKKSGVNQIDGNVLID
Query Conservation   


 
 .   
  
   
   

  
 
 

 
Alig confidence 






.
















.....



Template Conservation   

   

  


 

  

  

 .....



Template Sequence  TVRTKYGTKAQLERAIGSLKSNDIN. . . . . VYGD
Template Known Secondary structure  BSS
SS

TT
.....
Template Predicted Secondary structure 










.....
Template SS confidence 

































   72.......80.........90...... ...100
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions