Job Description P24228 Confidence 97.49% Date Thu Jan 5 11:41:22 GMT 2012 Rank 60 Aligned Residues 152 % Identity 19% Template c1mwuA_ PDB info PDB header:biosynthetic protein Chain: A: PDB Molecule:penicillin-binding protein 2a; PDBTitle: structure of methicillin acyl-penicillin binding protein 2a2 from methicillin resistant staphylococcus aureus strain3 27r at 2.60 a resolution. Resolution 2.60 Å

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		299	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.																			.	.	350	.	.	.	.	.	.	.	.	.	360
Predicted Secondary structure																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	K	I	M	L	K	K	S	D	N	M	I	A	D	T	V	F	R	M	I	G	H	A	R	F	N	V	P	G	T	W	R	A	G	S	D	A	V	R	Q	I	L	R	Q	Q	A	G	V	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	G	N	T	I	I	A	D	G	S	G	L	S
Query Conservation																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.												.					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																						.	.	.	.	.	.	.	.	.	.	.	.	.												.
Template Sequence		L	K	Q	A	I	E	S	S	D	N	I	F	F	A	R	V	A	L	E	L	.	.	.	.	.	.	.	.	.	.	.	.	.	G	S	K	K	F	E	K	G	M	K	K	.	L	G	V	G	E	D	I	P	S	D	Y	P	F	Y	N	A	Q	I	S	N	N	L	D	N	E	I	L	L	A	D	S	G	Y	G	Q
Template Known Secondary structure								T	T													.	.	.	.	.	.	.	.	.	.	.	.	.												.		T	T	T	S				S	S	S						B	S				T	T	S								T	T	T
Template Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.	.												.
Template SS confidence
		455	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.														.	.	.	.	.	480	.	.	.	.	.		.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520
		361	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.																									.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.
Predicted Secondary structure																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	H	N	L	I	A	P	A	T	M	M	Q	V	L	Q	Y	I	A	Q	H	D	N	E	L	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	I	S	M	L	P	L	A	G	Y	D	G	S	L	Q	Y	R	A	G	L	H	Q	A	G	V	D	G	K	V	S	A
Query Conservation																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.
Template Conservation																																																																						.	.	.	.	.
Template Sequence		G	E	I	L	I	N	P	V	Q	I	L	S	I	Y	S	A	L	E	N	N	G	N	I	N	A	P	H	L	L	K	D	T	K	N	K	V	W	K	K	N	I	I	S	K	E	N	I	N	L	L	T	D	G	M	Q	Q	V	V	N	K	T	H	K	E	D	I	Y	R	.	.	.	.	.	S	Y	A	N	L	I	G
Template Known Secondary structure		S	S		B	B											G	G	G	T	T	T						B		B	S	S	S							S		S	S																		T	T	T	T	T	T	T			.	.	.	.	.	T	T	S
Template Predicted Secondary structure																																																																						.	.	.	.	.
Template SS confidence
		522	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.						590	.	.	.	.	.	.
		417	.	.	420	.	.	.	.	.	.		.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.
Predicted Secondary structure												.
Query SS confidence												.
Query Sequence		K	T	G	S	L	Q	G	V	Y	N	.	L	A	G	F	I	T	T	A	S	G	Q	R	M	A	F	V	Q	Y	L	S	G	Y	A	V	E	P	A	D	Q	R	N	R	R	I	P	L	V	R	F	E	S	R	L	Y	K	D	I	Y	Q	N
Query Conservation												.
Alig confidence												.					.	.																			.	.	.	.	.
Template Conservation																	.	.																			.	.	.	.	.
Template Sequence		K	S	G	T	A	E	L	Q	I	G	W	F	I	S	Y	.	.	D	K	D	N	P	N	M	M	M	A	I	N	V	K	D	V	Q	D	.	.	.	.	.	K	G	M	A	S	Y	N	A	K	I	S	G	K	V	Y	D	E	L	Y	E	N
Template Known Secondary structure																	.	.		T	T	S		S											T	T	.	.	.	.	.	T	T	T																T	G	G
Template Predicted Secondary structure																	.	.																			.	.	.	.	.
Template SS confidence
		597	.	.	600	.	.	.	.	.	.	.	.	.	610	.			.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.						630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions