Return to main results Retrieve Phyre Job Id

Job DescriptionP18472
Confidence55.08%DateThu Jan 5 11:37:00 GMT 2012
Rank5Aligned Residues19
% Identity16%Templated2gica1
SCOP infoRhabdovirus nucleoprotein-like Rhabdovirus nucleoprotein-like Rhabdovirus nucleocapsid protein
Resolution2.92

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   102.......110.........120
Predicted Secondary structure 













Query SS confidence 


















Query Sequence  GRVFARQGEVMNPLQYVPF
Query Conservation 
 

  

  




 
  
Alig confidence 


















Template Conservation 

 

 

  
 
  
  
Template Sequence  GINIGKAGDTIGIFDLVSL
Template Known Secondary structure  T
TT
B

TT
S
Template Predicted Secondary structure 






Template SS confidence 


















   92.......100.........110
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions