Job Description Q46857 Confidence 100.00% Date Thu Jan 5 12:35:17 GMT 2012 Rank 10 Aligned Residues 270 % Identity 39% Template d1qwka_ SCOP info TIM beta/alpha-barrel NAD(P)-linked oxidoreductase Aldo-keto reductases (NADP) Resolution 1.60

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.					.	.	.	.	.	70	.	.	.	.	.	.			.	.
Predicted Secondary structure																																																														.	.	.	.													.	.
Query SS confidence																																																														.	.	.	.													.	.
Query Sequence		T	V	I	K	L	Q	D	G	N	V	M	P	Q	L	G	L	G	V	W	Q	A	S	N	E	E	V	I	T	A	I	Q	K	A	L	E	V	G	Y	R	S	I	D	T	A	A	A	Y	K	N	E	E	G	V	G	K	A	L	K	N	A	.	.	.	.	S	V	N	R	E	E	L	F	I	T	T	K	.	.	L	W
Query Conservation																																																														.	.	.	.													.	.
Alig confidence																																																														.	.	.	.													.	.
Template Conservation
Template Sequence		A	S	I	K	L	S	N	G	V	E	M	P	V	I	G	L	G	T	W	Q	S	S	P	A	E	V	I	T	A	V	K	T	A	V	K	A	G	Y	R	L	I	D	T	A	S	V	Y	Q	N	E	E	A	I	G	T	A	I	K	E	L	L	E	E	G	V	V	K	R	E	E	L	F	I	T	T	K	A	W	T	H
Template Known Secondary structure							T	T	S					S	B					T	T																	T								G	G	G	T																T	S			G	G	G									T	T
Template Predicted Secondary structure
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.									.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
Predicted Secondary structure																																			.	.	.	.	.	.	.	.
Query SS confidence																																			.	.	.	.	.	.	.	.
Query Sequence		N	D	D	H	K	R	P	R	E	A	L	L	D	S	L	K	K	L	Q	L	D	Y	I	D	L	Y	L	M	H	W	P	V	P	.	.	.	.	.	.	.	.	A	I	D	H	Y	V	E	A	W	K	G	M	I	E	L	Q	K	E	G	L	I	K	S	I	G	V	C	N	F	Q	I	H	H	L	Q	R	L	I	D
Query Conservation																																			.	.	.	.	.	.	.	.
Alig confidence																																			.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	L	A	P	G	K	L	E	G	G	L	R	E	S	L	K	K	L	Q	L	E	Y	V	D	L	Y	L	A	H	M	P	A	A	F	N	D	D	M	S	E	H	I	A	S	P	V	E	D	V	W	R	Q	F	D	A	V	Y	K	A	G	L	A	K	A	V	G	V	S	N	W	N	N	D	Q	I	S	R	A	L	A
Template Known Secondary structure		T	S	S	T	T	T													T		S		B	S					S		S					T	T	S		S																			T	T	S	B	S	S					S											T
Template Predicted Secondary structure
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.																		.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.
Predicted Secondary structure																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	T	G	V	T	P	V	I	N	Q	I	E	L	H	P	L	M	Q	Q	R	Q	L	H	A	W	N	A	T	H	K	I	Q	T	E	S	W	S	P	L	A	Q	G	G	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	V	F	D	Q	K	V	I	R	D	L	A	D	K	Y	G	K	T	P
Query Conservation																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	G	L	T	P	V	H	N	S	Q	V	E	L	H	L	Y	F	P	Q	H	D	H	V	D	F	C	K	K	H	N	I	S	V	T	S	Y	A	T	L	G	S	P	G	R	V	N	F	T	L	P	T	G	Q	K	L	D	W	A	P	A	P	S	D	L	Q	D	Q	N	V	L	A	L	A	E	K	T	H	K	T	P
Template Known Secondary structure		T		S	S										B	T	T	B												T	T							S	T	T		S							B		T	T			B							S	S	G	G	G												T
Template Predicted Secondary structure
Template SS confidence
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
		214	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	Q	I	V	I	R	W	H	L	D	S	G	L	V	V	I	P	K	S	V	T	P	S	R	I	A	E	N	F	D	V	W	D	F	R	L	D	K	D	E	L	G	E	I	A	K	L	D	Q	G	K	R	L	G	P	D	P	D	Q	F	G	G
Query Conservation
Alig confidence																																																									.
Template Conservation																																																									.
Template Sequence		A	Q	V	L	L	R	Y	A	L	D	R	G	C	A	I	L	P	K	S	I	Q	E	N	R	I	K	E	N	F	E	V	F	D	F	S	L	T	E	E	D	I	A	K	L	E	E	S	K	N	S	Q	R	L	F	L	.	Q	D	F	M	T	G
Template Known Secondary structure												T	T									S											S	S												T	T	T						S			.		G	G	G	T	T
Template Predicted Secondary structure																																																									.
Template SS confidence
		246	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300		.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions