Job Description Q46857 Confidence 100.00% Date Thu Jan 5 12:35:17 GMT 2012 Rank 29 Aligned Residues 272 % Identity 23% Template c3n2tA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:putative oxidoreductase; PDBTitle: structure of the glycerol dehydrogenase akr11b4 from gluconobacter2 oxydans Resolution 2.00 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.									.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
Predicted Secondary structure																												.	.	.	.	.	.	.	.
Query SS confidence																												.	.	.	.	.	.	.	.
Query Sequence		M	A	N	P	T	V	I	K	L	Q	D	G	N	V	M	P	Q	L	G	L	G	V	W	Q	A	S	.	.	.	.	.	.	.	.	N	E	E	V	I	T	A	I	Q	K	A	L	E	V	G	Y	R	S	I	D	T	A	A	A	Y	K	N	E	E	G	V	G	K	A	L	K	N	A	S	V	N	R	E	E	L	F
Query Conservation																												.	.	.	.	.	.	.	.
Alig confidence																												.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		M	A	S	D	T	I	R	I	P	G	I	D	T	P	L	S	R	V	A	L	G	T	W	A	I	G	G	W	M	W	G	G	P	D	D	D	N	G	V	R	T	I	H	A	A	L	D	E	G	I	N	L	I	D	T	A	P	V	Y	G	F	G	H	S	E	E	I	V	G	R	A	L	A	E	K	P	N	K	A	H
Template Known Secondary structure			T	T	S					T	T		S	S				S						T	T	S	S		S	S	S		S	T	T														T	T								T	T	G	G	G	G													S
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		73	.	.	.	.	.	.																80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.
Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	T	T	K	L	W	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	D	H	K	R	P	R	E	A	L	L	D	S	L	K	K	L	Q	L	D	Y	I	D	L	Y	L	M	H	W	P	V	P	A	I	D	H	Y	V	E	A	W	K	G	M	I	E	L	Q	K	E	G	L	I	K	S	I	G	V
Query Conservation									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.
Template Conservation																																																											.
Template Sequence		V	A	T	K	L	G	L	H	W	V	G	E	D	E	K	N	M	K	V	F	R	D	S	R	P	A	R	I	R	K	E	V	E	D	S	L	R	R	L	R	V	E	T	I	D	L	E	Q	I	H	W	P	D	D	K	T	P	.	I	D	E	S	A	R	E	L	Q	K	L	H	Q	D	G	K	I	R	A	L	G	V
Template Known Secondary structure												S	S	S	T	T	T																								T		S	S							S	S			T	T	S		.														T	T	S
Template Predicted Secondary structure																																																											.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.		.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		C	N	F	Q	I	H	H	L	Q	R	L	I	D	E	T	G	V	T	P	V	I	N	Q	I	E	L	H	P	L	M	Q	Q	R	Q	L	H	A	W	N	A	T	H	K	I	Q	T	E	S	W	S	P	L	A	Q	G	G	K	G	V	F	D	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	N	F	S	P	E	Q	M	D	I	F	R	E	V	A	P	L	A	T	I	Q	P	P	L	N	L	F	E	R	T	I	E	K	D	I	L	P	Y	A	E	K	H	N	A	V	V	L	A	Y	G	A	L	C	R	G	L	L	T	G	K	M	N	R	D	T	T	F	P	K	D	D	L	R	S	N	D	P	K	F	Q
Template Known Secondary structure			S													S								B		B	T	T	B		G	G	G	G	T									T						B		T	T	G	G	G	G	G	G	T				T	T					T	T	S	G	G	G	G		G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
													200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.		.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.																													.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.																													.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	K	V	I	R	D	L	A	D	K	Y	G	K	T	P	A	Q	I	V	I	R	W	H	L	D	S	G	L	V	.	V	I	P	K	S	V	T	P	S	R	I	A	E	N	F	D	V	W	D	F	R	L	D	K	D	E	L	G	E	I	A	K	L	D	Q	G	K	R	L	G
Query Conservation		.	.	.	.	.	.	.	.	.	.	.																													.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.																													.
Template Conservation
Template Sequence		K	P	N	F	E	K	Y	L	A	A	M	D	E	F	E	K	L	A	E	K	R	G	K	S	V	M	A	F	A	V	R	W	V	L	D	Q	G	P	V	I	A	L	W	G	A	R	K	P	G	Q	V	S	G	V	K	D	V	F	G	W	S	L	T	D	E	E	K	K	A	V	D	D	I	L	A	R	H	V	P	N
Template Known Secondary structure		T	T																			T	T													T	T	T	T								S	S	G	G	G	G	T	T					S	S																			S
Template Predicted Secondary structure
Template SS confidence
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.
		268	.	270	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	D	P	D	Q	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	I	D	P	T	F
Template Known Secondary structure					S	S
Template Predicted Secondary structure
Template SS confidence
		320	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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