Job Description Q46857 Confidence 100.00% Date Thu Jan 5 12:35:17 GMT 2012 Rank 40 Aligned Residues 260 % Identity 33% Template c3ln3A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:dihydrodiol dehydrogenase; PDBTitle: crystal structure of putative reductase (np_038806.2) from2 mus musculus at 1.18 a resolution Resolution 1.18 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.		.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure																																																															.
Query SS confidence																																																															.
Query Sequence		V	I	K	L	Q	D	G	N	V	M	P	Q	L	G	L	G	V	W	Q	A	S	N	E	E	V	I	T	A	I	Q	K	A	L	E	V	G	Y	R	S	I	D	T	A	A	A	Y	K	N	E	E	G	V	G	K	A	L	K	N	A	S	V	.	N	R	E	E	L	F	I	T	T	K	L	W	N	D	D	H	K	R
Query Conservation																																																															.
Alig confidence																									.																																						.														.	.
Template Conservation																									.																																																				.	.
Template Sequence		H	C	V	L	N	D	G	H	L	I	P	A	L	G	F	G	T	Y	P	E	V	P	S	.	S	L	E	A	A	C	L	A	L	D	V	G	Y	R	H	V	D	T	A	Y	A	Y	Q	V	E	E	E	I	G	Q	A	I	Q	S	I	A	G	V	V	R	E	D	L	F	V	T	T	K	L	W	C	.	.	T	C	F
Template Known Secondary structure			B			T	T	S				B	S	S											.												T								G	G	G	T																		T	T									G	.	.	G	G
Template Predicted Secondary structure																									.																																																				.	.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.		.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.			80	.	.
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110																	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
Predicted Secondary structure																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	R	E	A	L	L	D	S	L	K	K	L	Q	L	D	Y	I	D	L	Y	L	M	H	W	P	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	A	I	D	H	Y	V	E	A	W	K	G	M	I	E	L	Q	K	E	G	L	I	K	S	I	G	V	C	N	F	Q	I	H	H	L	Q	R	L
Query Conservation																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.
Template Conservation																																																												.	.
Template Sequence		R	P	E	L	V	P	A	L	E	S	L	L	Q	L	D	Y	V	D	L	Y	I	X	H	Y	P	V	P	X	S	G	D	N	D	F	P	V	N	E	Q	G	S	L	L	D	T	V	D	F	C	D	T	W	E	R	L	E	E	C	.	.	D	A	G	L	V	S	I	G	V	S	N	F	N	H	R	Q	L	E	R	I
Template Known Secondary structure		S	G	G	G											S			S					S		S						S		S	S				T	T																				.	.			S								S
Template Predicted Secondary structure																																																												.	.
Template SS confidence
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.			.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.						200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.
Predicted Secondary structure																																																					.	.	.	.	.
Query SS confidence																																																					.	.	.	.	.
Query Sequence		I	D	E	T	G	V	T	P	V	I	N	Q	I	E	L	H	P	L	M	Q	Q	R	Q	L	H	A	W	N	A	T	H	K	I	Q	T	E	S	W	S	P	L	A	Q	G	G	K	G	V	F	D	Q	.	.	.	.	.	K	V	I	R	D	L	A	D	K	Y	G	K	T	P	A	Q	I	V	I	R	W	H	L	D
Query Conservation																																																					.	.	.	.	.
Alig confidence						.																.								.																							.	.	.	.	.
Template Conservation						.																.								.
Template Sequence		L	N	P	G	.	L	Y	P	V	C	N	Q	V	E	C	H	L	Y	L	N	.	Q	R	L	L	D	Y	C	.	E	S	D	I	V	L	V	A	Y	G	A	L	G	T	Q	R	Y	E	W	V	D	Q	N	S	P	V	L	L	N	D	P	V	L	C	D	V	A	N	R	S	P	A	L	I	A	L	R	Y	L	I	Q
Template Known Secondary structure						.											B	T	T	B		.								.										S	T	T	S							S		T	T	S			G	G	G
Template Predicted Secondary structure						.																.								.
Template SS confidence
		177	.	.	180		.	.	.	.	.	.	.	.	.	190	.	.	.	.	.		.	.	.	.	200	.	.		.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.
		224	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.					.	270	.	.	.	.	.
Predicted Secondary structure																																															.	.	.	.
Query SS confidence																																															.	.	.	.
Query Sequence		S	G	L	V	V	I	P	K	S	V	T	P	S	R	I	A	E	N	F	D	V	W	D	F	R	L	D	K	D	E	L	G	E	I	A	K	L	D	Q	G	K	R	L	G	P	.	.	.	.	D	P	D	Q	F	G	G
Query Conservation																																															.	.	.	.
Alig confidence														.																				.													.	.	.	.
Template Conservation														.																				.
Template Sequence		R	G	I	V	P	L	A	Q	S	F	E	N	.	E	X	R	E	N	L	Q	V	F	G	F	Q	L	S	P	E	D	X	T	.	L	D	G	L	N	N	F	R	Y	L	P	A	E	F	L	V	D	H	P	E	Y	P	F
Template Known Secondary structure		T	T											.						G	G	G	G	G					T	T	T			.	G	G	G	G					S				G	G	G		S	S	T	T		T	T
Template Predicted Secondary structure														.																				.
Template SS confidence
		263	.	.	.	.	.	.	270	.	.	.	.		.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.		.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions