Job Description Q46857 Confidence 100.00% Date Thu Jan 5 12:35:17 GMT 2012 Rank 4 Aligned Residues 267 % Identity 45% Template c3f7jB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:yvgn protein; PDBTitle: b.subtilis yvgn Resolution 1.70 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.		.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.			.	.
Predicted Secondary structure																											.																																																			.	.
Query SS confidence																											.																																																			.	.
Query Sequence		A	N	P	T	V	I	K	L	Q	D	G	N	V	M	P	Q	L	G	L	G	V	W	Q	A	S	.	N	E	E	V	I	T	A	I	Q	K	A	L	E	V	G	Y	R	S	I	D	T	A	A	A	Y	K	N	E	E	G	V	G	K	A	L	K	N	A	S	V	N	R	E	E	L	F	I	T	T	K	.	.	L	W
Query Conservation																											.																																																			.	.
Alig confidence																											.																																																			.	.
Template Conservation
Template Sequence		S	L	K	D	T	V	K	L	H	N	G	V	E	M	P	W	F	G	L	G	V	F	K	V	E	N	G	N	E	A	T	E	S	V	K	A	A	I	K	N	G	Y	R	S	I	D	T	A	A	I	Y	K	N	E	E	G	V	G	I	G	I	K	E	S	G	V	A	R	E	E	L	F	I	T	S	K	V	W	N	E
Template Known Secondary structure		S	T	T						T	T	S					S	B					T	T			S														T	T								G	G	G	T													T	S		G	G	G									G	G
Template Predicted Secondary structure
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	D	D	H	K	R	P	R	E	A	L	L	D	S	L	K	K	L	Q	L	D	Y	I	D	L	Y	L	M	H	W	P	V	P	A	I	D	H	Y	V	E	A	W	K	G	M	I	E	L	Q	K	E	G	L	I	K	S	I	G	V	C	N	F	Q	I	H	H	L	Q	R	L	I	D	E	T	G	V	T	P	V	I
Query Conservation
Alig confidence																																				.	.
Template Conservation																																				.	.
Template Sequence		D	Q	G	Y	E	T	T	L	A	A	F	E	K	S	L	E	R	L	Q	L	D	Y	L	D	L	Y	L	I	H	W	P	G	K	D	.	.	K	Y	K	D	T	W	R	A	L	E	K	L	Y	K	D	G	K	I	R	A	I	G	V	S	N	F	Q	V	H	H	L	E	E	L	L	K	D	A	E	I	K	P	M	V
Template Known Secondary structure		G		S																T		S								S				S	S	.	.															T	T	S								S														S	S			S
Template Predicted Secondary structure																																				.	.
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.			.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	Q	I	E	L	H	P	L	M	Q	Q	R	Q	L	H	A	W	N	A	T	H	K	I	Q	T	E	S	W	S	P	L	A	Q	G	G	K	G	V	F	D	Q	K	V	I	R	D	L	A	D	K	Y	G	K	T	P	A	Q	I	V	I	R	W	H	L	D	S	G	L	V	V	I	P	K	S	V	T	P	S	R	I
Query Conservation
Alig confidence																																				.	.
Template Conservation																																				.	.
Template Sequence		N	Q	V	E	F	H	P	R	L	T	Q	K	E	L	R	D	Y	C	K	G	Q	G	I	Q	L	E	A	W	S	P	L	M	Q	G	.	.	Q	L	L	D	N	E	V	L	T	Q	I	A	E	K	H	N	K	S	V	A	Q	V	I	L	R	W	D	L	Q	H	G	V	V	T	I	P	K	S	I	K	E	H	R	I
Template Known Secondary structure							B	T	T	B													T							S	T	T	G	G	G	.	.	T	T	T	T												T														T	T						B			S
Template Predicted Secondary structure																																				.	.
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.			.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	E	N	F	D	V	W	D	F	R	L	D	K	D	E	L	G	E	I	A	K	L	D	Q	G	K	R	L	G	P	D	P	D	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	E	N	A	D	I	F	D	F	E	L	S	Q	E	D	M	D	K	I	D	A	L	N	K	D	E	R	V	G	P	N	P	D	E
Template Known Secondary structure					T			S	S													T	T						S	S			T	T	T
Template Predicted Secondary structure
Template SS confidence
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions