Job Description Q46857 Confidence 100.00% Date Thu Jan 5 12:35:17 GMT 2012 Rank 31 Aligned Residues 262 % Identity 26% Template c3erpA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:putative oxidoreductase; PDBTitle: structure of idp01002, a putative oxidoreductase from and essential2 gene of salmonella typhimurium Resolution 1.55 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.						.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.						.	.	.	.	.	.	.	60	.	.	.	.	.	.	.		.	.	70
Predicted Secondary structure																										.	.	.	.	.																												.	.	.	.	.																.
Query SS confidence																										.	.	.	.	.																												.	.	.	.	.																.
Query Sequence		A	N	P	T	V	I	K	L	Q	D	G	N	V	M	P	Q	L	G	L	G	V	W	Q	A	.	.	.	.	.	S	N	E	E	V	I	T	A	I	Q	K	A	L	E	V	G	Y	R	S	I	D	T	A	A	A	Y	K	.	.	.	.	.	N	E	E	G	V	G	K	A	L	K	N	A	S	V	N	.	R	E	E
Query Conservation																										.	.	.	.	.																												.	.	.	.	.																.
Alig confidence																										.	.	.	.	.																												.	.	.	.	.																.
Template Conservation
Template Sequence		T	M	E	Y	R	R	C	G	R	S	G	V	K	L	P	A	I	S	L	G	L	W	H	N	F	G	D	T	T	R	V	E	N	S	R	A	L	L	Q	R	A	F	D	L	G	I	T	H	F	D	L	A	N	N	Y	G	P	P	P	G	S	A	E	C	N	F	G	R	I	L	Q	E	D	F	L	P	W	R	D	E
Template Known Secondary structure		S							S	S	S	S					S						S	S	S		S	T	T	S															T	T								T	T		T	T	T	T	T														T	G	G	G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
		71	.	.	.	.	.	.	.	.	80											.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.
Query SS confidence												.	.	.	.	.	.	.	.	.	.
Query Sequence		L	F	I	T	T	K	L	W	N	D	.	.	.	.	.	.	.	.	.	.	D	H	K	R	P	R	E	A	L	L	D	S	L	K	K	L	Q	L	D	Y	I	D	L	Y	L	M	H	W	P	V	P	A	I	D	H	Y	V	E	A	W	K	G	M	I	E	L	Q	K	E	G	L	I	K	S	I	G	V	C	N	F
Query Conservation												.	.	.	.	.	.	.	.	.	.
Alig confidence												.	.	.	.	.	.	.	.	.	.																																			.
Template Conservation																																																								.
Template Sequence		L	I	I	S	T	K	A	G	Y	T	M	W	D	G	P	Y	G	D	W	G	S	R	K	Y	L	I	A	S	L	D	Q	S	L	K	R	M	G	L	E	Y	V	D	I	F	Y	H	H	R	P	D	P	E	T	P	.	L	K	E	T	M	K	A	L	D	H	L	V	R	H	G	K	A	L	Y	V	G	I	S	N	Y
Template Known Secondary structure									S	S			S	S	S	T	T	S	S	T	T																	T		S									S			T	T	S		.														T	T	S								S
Template Predicted Secondary structure																																																								.
Template SS confidence
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.		.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
		141	.	.	.	.	.	.	.	.				150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.			.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.											200	.	.	.	.	.
Predicted Secondary structure											.	.	.																				.	.																																.	.	.	.	.	.	.	.	.	.
Query SS confidence											.	.	.																				.	.																																.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	I	H	H	L	Q	R	L	I	.	.	.	D	E	T	G	V	T	P	V	I	N	Q	I	E	L	H	P	L	M	Q	.	.	Q	R	Q	L	H	A	W	N	A	T	H	K	I	Q	T	E	S	W	S	P	L	A	Q	G	G	K	G	V	F	D	Q	.	.	.	.	.	.	.	.	.	.	K	V	I	R	D	L
Query Conservation											.	.	.																				.	.																																.	.	.	.	.	.	.	.	.	.
Alig confidence											.	.	.																				.	.																																.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	A	D	L	A	R	Q	A	I	D	I	L	E	D	L	G	T	P	C	L	I	H	Q	P	K	Y	S	L	F	E	R	W	V	E	D	G	L	L	A	L	L	Q	E	K	G	V	G	S	I	A	F	S	P	L	A	G	G	Q	L	T	D	R	Y	L	N	I	T	A	D	K	L	E	K	V	R	R	L	N	E	L
Template Known Secondary structure																	T									B		B	T	T	B		G	G	G	G	T									T						B	S	T	T	G	G	G	T	S	S	G	G	G	T
Template Predicted Secondary structure
Template SS confidence
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250
		206	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.			.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.		.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.
Predicted Secondary structure																								.	.																			.
Query SS confidence																								.	.																			.
Query Sequence		A	D	K	Y	G	K	T	P	A	Q	I	V	I	R	W	H	L	D	S	G	L	V	.	.	V	I	P	K	S	V	T	P	S	R	I	A	E	N	F	D	V	W	.	D	F	R	L	D	K	D	E	L	G	E	I	A	K	L	D	Q	G	K
Query Conservation																								.	.																			.
Alig confidence																								.	.																			.
Template Conservation
Template Sequence		A	A	R	R	G	Q	K	L	S	Q	M	A	L	A	W	V	L	R	N	D	N	V	T	S	V	L	I	G	A	S	K	P	S	Q	I	E	D	A	V	G	M	L	A	N	R	R	F	S	A	A	E	C	A	E	I	D	A	I	L	E	G	R
Template Known Secondary structure					T	T												T	T	T	S										S	S										G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions