Job Description Q46857 Confidence 14.77% Date Thu Jan 5 12:35:17 GMT 2012 Rank 98 Aligned Residues 164 % Identity 10% Template c3ddmD_ PDB info PDB header:lyase Chain: D: PDB Molecule:putative mandelate racemase/muconate lactonizing PDBTitle: crystal structure of mandelate racemase/muconate2 lactonizing enzyme from bordetella bronchiseptica rb50 Resolution 2.60 Å

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		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	N	V	M	P	Q	L	G	L	G	V	W	Q	A	S	N	E	E	V	I	T	A	I	Q	K	A	L	E	V	G	Y	R	S	I	D	T	A	A	A	Y	K	N	E	E	G	V	G	K	A	L	K	N	A	S	V	N	R	E	E	L	F	I	T	T	K	L	W	N	D	D	H	K	R	P	R	E	A	L	L	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	G	S	G	D	R	I	G	V	Y	A	S	G	I	N	P	E	N	P	E	D	V	V	A	R	K	A	A	E	G	Y	R	A	F	K	L	K	V	G	F	D	D	A	R	D	V	R	N	A	L	H	V	R	E	L	L	G	A	A	T	P	L	M	A	D	A	N	Q	G	W	D	L	P	R	A	R	Q	M	A	Q
Template Known Secondary structure		T		S													S	S													T									S	S																		S	S	S							T	T
Template Predicted Secondary structure
Template SS confidence
		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.		.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.		.	.	.	.	.
Predicted Secondary structure																																												.																																.
Query SS confidence																																												.																																.
Query Sequence		S	L	K	K	L	Q	L	D	Y	I	D	L	Y	L	M	H	W	P	V	P	A	I	D	H	Y	V	E	A	W	K	G	M	I	E	L	Q	K	E	G	L	I	K	.	S	I	G	V	C	N	F	Q	I	H	H	L	Q	R	L	I	D	E	T	G	V	T	P	V	I	N	Q	I	E	L	H	.	P	L	M	Q	Q
Query Conservation																																												.																																.
Alig confidence							.	.	.	.	.																	.	.	.	.													.																																.
Template Conservation							.	.	.	.	.																	.	.	.	.
Template Sequence		R	L	G	P	A	.	.	.	.	.	Q	L	D	W	L	E	E	P	L	R	A	D	R	P	A	A	.	.	.	.	E	W	A	E	L	A	Q	A	A	P	M	P	L	A	G	G	E	N	I	A	G	V	A	A	F	E	T	A	L	A	A	R	S	L	R	V	M	Q	P	D	L	A	K	W	G	G	F	S	G	C
Template Known Secondary structure				G	G	G	.	.	.	.	.									S		T	T	S				.	.	.	.										S	S						T	T			S											T									T	T	T	T	T
Template Predicted Secondary structure							.	.	.	.	.																	.	.	.	.
Template SS confidence
		221	.	.	.	.						.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.					.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	Q	L	H	A	W	N	A	T	H	K	I	Q	T	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	P	V	A	R	A	V	V	A	A	G	L	R	Y	C
Template Known Secondary structure											T	T
Template Predicted Secondary structure
Template SS confidence
		292	.	.	.	.	.	.	.	300	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions