Return to main results Retrieve Phyre Job Id

Job DescriptionP80644
Confidence95.34%DateThu Jan 5 12:33:13 GMT 2012
Rank70Aligned Residues76
% Identity13%Templated1rlja_
SCOP infoFlavodoxin-like Flavoproteins Flavoprotein NrdI
Resolution2.00

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70....... ..80
Predicted Secondary structure 




























.


Query SS confidence 











































































.


Query Sequence  RVITLAGSPRFPSRSSSLLEYAREKLNGLDVEVYHWNLQNFAPEDLLYARFDSPALKTFTEQLQQADGLIVATPVY. KAA
Query Conservation 


 
 

 
  
 
  

      
   
      

                        
  

 


 

 
.   
Alig confidence 







..











.........








....................















.


Template Conservation   
 
 
 
.. 




  
  
.........         ....................         



 


 

Template Sequence  MVQIIFDS. . KTGNVQRFVNKT. . . . . . . . . GFQQIRKVD. . . . . . . . . . . . . . . . . . . . EMDHVDTPFVLVTYTTNFGQ
Template Known Secondary structure 



..SSSTTS.........

STT....................S
S


S


BGGGB
Template Predicted Secondary structure 
..


.........



....................








Template SS confidence 















































































   1....... .10.........20 ......... 30.........40.........
 
   81........90.........100.........110...
Predicted Secondary structure 










Query SS confidence 
































Query Sequence  YSGALKTLLDLLPERALQGKVVLPLATGGTVAH
Query Conservation      

  

 
      

    
 
 
    
Alig confidence 










.....
















Template Conservation   
     

  .....
      
 
 

  
 
Template Sequence  VPASTQSFLEK. . . . . YAHLLLGVAASGNKVWG
Template Known Secondary structure 

.....GGG
GGGG
Template Predicted Secondary structure 

.....








Template SS confidence 
































   50.........60 .........70.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions